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基于p30基因的实时逆转录聚合酶链反应检测猫杯状病毒的评估

Evaluation of a p30 gene-based real-time reverse transcriptase polymerase chain reaction assay for detection of feline caliciviruses.

作者信息

Scansen Brian A, Wise Annabel G, Kruger John M, Venta Patrick J, Maes Roger K

机构信息

Department of Small Animal Clinical Sciences, Michigan State University, College of Veterinary Medicine, East Lansing, MI 48824-1314, USA.

出版信息

J Vet Intern Med. 2004 Jan-Feb;18(1):135-8. doi: 10.1892/0891-6640(2004)18<135:eoapgr>2.0.co;2.

Abstract

This report describes a feline calicivirus (FCV) p30 gene-based real-time SYBR Green I reverse transcriptase polymerase chain reaction (RT-PCR) assay that is capable of detecting low virus concentrations and a broad range of FCV isolates. The assay consisted of a 1-step RT-PCR reaction with primers delineating a 126-base-pair (bp) region of the FCV p30 gene. Sensitivity of the RT-PCR assay was determined to be equivalent to a FCV titer of 1.2 x 10(1) to 1.2 x 10(2) TCID50/mL. The assay was linear over a wide range of template concentrations and had a reaction efficiency of 95%. Specific FCV amplification products were detected from 51 wild-type FCV isolates, whereas specific products were not detected from a canine calicivirus, a rabbit calicivirus, and a bovine calicivirus. The primers used in this study amplified a large number of North American FCV isolates and further confirm the diagnostic utility of p30 gene-based real-time RT-PCR for detection of FCV.

摘要

本报告描述了一种基于猫杯状病毒(FCV)p30基因的实时荧光定量SYBR Green I逆转录聚合酶链反应(RT-PCR)检测方法,该方法能够检测低病毒浓度以及多种FCV分离株。该检测方法由一步RT-PCR反应组成,所用引物界定了FCV p30基因的一个126碱基对(bp)区域。RT-PCR检测方法的灵敏度确定为相当于1.2×10¹至1.2×10² TCID50/mL的FCV滴度。该检测方法在广泛的模板浓度范围内呈线性,反应效率为95%。从51株野生型FCV分离株中检测到了特异性的FCV扩增产物,而从犬杯状病毒、兔杯状病毒和牛杯状病毒中未检测到特异性产物。本研究中使用的引物扩增了大量北美FCV分离株,并进一步证实了基于p30基因的实时RT-PCR在检测FCV方面的诊断效用。

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