Verotta Davide
Department of Biopharmaceutics and Pharmaceutical Chemistry, Box 0446, University of California, San Francisco, CA 94143, USA.
J Pharmacokinet Pharmacodyn. 2003 Oct;30(5):337-62. doi: 10.1023/b:jopa.0000008158.30235.59.
Nonparametric black-box modeling has a long successful history of applications in pharmacokinetics (PK) (notably in deconvolution), but is rarely used in pharmacodynamics (PD). The main reason is associated with the fact that PK systems are often linear in respect to drug inputs, while the reverse is true for many PK/PD systems. In the PK/PD field existing non-parametric methods can deal with linear systems, but they cannot describe non-linear systems. Our purpose is to describe a novel implementation of a general nonparametric model which can represent non-linear systems, and in particular non-linear PK/PD systems, The model is based on a Volterra series, which is an integral series expansion of the response of a system in terms of its kernels and the inputs to the system. In PK we are familiar with the first term of the Volterra series, the convolution of the first kernel of the system (the so-called PK disposition function) with drug input rates. The main advantages of higher order Volterra representations is that they are general representations and can be used to describe and predict the response of an arbitrary (PK/ PD) system without any prior knowledge on the structure of the system. The main problem of the representation is that in a non-parametric representation of the kernels the number of parameters to be estimated grows geometrically with the order of the kernel. We developed a method to estimate the kernels in a Volterra-series which overcomes this problem. The method (i) is fully non-parametric (the kernels are represented using multivariate splines), (ii) is maximum-likelihood based, (iii) is adaptive (the order of the series and the dimensionality of each kernel is selected by the method), and (iv) allows for non-equispaced observations (thus allowing a reduction of the number of parameters in the representation, and the analysis of, e.g., PK/PD observations). The method is based on an adaptation of Friedmans's Multivariate Adaptive Regression Spline method. Examples demonstrate the possible application of the approach to the analysis of different PK/PD systems.
非参数黑箱建模在药代动力学(PK)(尤其是反褶积)中有着长期成功的应用历史,但在药效动力学(PD)中很少使用。主要原因与以下事实有关:PK系统通常相对于药物输入是线性的,而许多PK/PD系统则相反。在PK/PD领域,现有的非参数方法可以处理线性系统,但无法描述非线性系统。我们的目的是描述一种通用非参数模型的新颖实现方式,该模型可以表示非线性系统,特别是非线性PK/PD系统。该模型基于Volterra级数,它是系统响应关于其核和系统输入的积分级数展开。在PK中,我们熟悉Volterra级数的第一项,即系统的第一个核(所谓的PK处置函数)与药物输入速率的卷积。高阶Volterra表示的主要优点是它们是通用表示,可以用于描述和预测任意(PK/PD)系统的响应,而无需对系统结构有任何先验知识。该表示的主要问题是,在核的非参数表示中,待估计的参数数量随核的阶数呈几何增长。我们开发了一种估计Volterra级数中核的方法,该方法克服了这个问题。该方法(i)是完全非参数的(核使用多元样条表示),(ii)基于最大似然,(iii)是自适应的(级数的阶数和每个核的维度由该方法选择),并且(iv)允许非等距观测(从而减少表示中的参数数量,并分析例如PK/PD观测)。该方法基于对Friedman多元自适应回归样条方法的改编。示例展示了该方法在分析不同PK/PD系统中的可能应用。