• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

具有不同流动性的相同折叠结构:沙漠蝗(Schistocerca gregaria)中小蛋白酶抑制剂的主链动力学

Same fold with different mobility: backbone dynamics of small protease inhibitors from the desert locust, Schistocerca gregaria.

作者信息

Szenthe Borbála, Gáspári Zoltán, Nagy Attila, Perczel András, Gráf László

机构信息

Department of Biochemistry, Eötvös Loránd University, 1117 Pázmány Street 1/C, Budapest, Hungary.

出版信息

Biochemistry. 2004 Mar 30;43(12):3376-84. doi: 10.1021/bi035689+.

DOI:10.1021/bi035689+
PMID:15035609
Abstract

SGCI (Schistocerca gregaria chymotrypsin inhibitor) and SGTI (Sch. gregaria trypsin inhibitor) are small, 35-residue serine protease inhibitors with intriguing taxon specificity: SGTI is specific for arthropod proteases while SGCI is an excellent inhibitor on both mammalian and arthropodal enzymes. Here we report the cloning, expression, and (15)N backbone dynamics investigations of these peptides. Successful expression could be achieved by a "dimeric" construct similar to the natural precursor of the inhibitors. An engineered methionine residue between the two modules served as a unique cyanogen bromide cleavage site to cleave the precursor and physically separate SGCI and SGTI. The overall correlation time of the precursor (5.29 ns) as well as the resulted SGCI (3.14 ns) and SGTI (2.96 ns) are as expected for proteins of this size. General order parameters (S(2)) for the inhibitors are lower than those characteristic of well-folded proteins. Values in the binding loop region are even lower. Interestingly, the distribution of residues for which a chemical exchange (R(ex)) term should be considered is strikingly different in SGCI and SGTI. Together with H-D exchange studies, this indicates that the internal dynamics of the two closely related molecules differ. We suggest that the dynamic properties of these inhibitors is one of the factors that determine their specificity.

摘要

沙漠蝗胰凝乳蛋白酶抑制剂(SGCI)和沙漠蝗胰蛋白酶抑制剂(SGTI)是由35个氨基酸残基组成的小型丝氨酸蛋白酶抑制剂,具有引人关注的分类群特异性:SGTI对节肢动物蛋白酶具有特异性,而SGCI对哺乳动物和节肢动物的酶都是一种优秀的抑制剂。在此,我们报告了这些肽段的克隆、表达及(15)N主链动力学研究。通过一种类似于抑制剂天然前体的“二聚体”构建体可实现成功表达。两个模块之间的一个工程化甲硫氨酸残基作为一个独特的溴化氰切割位点,用于切割前体并将SGCI和SGTI物理分离。前体(5.29纳秒)以及所得的SGCI(3.14纳秒)和SGTI(2.96纳秒)的整体相关时间与这种大小的蛋白质预期相符。抑制剂的一般序参数(S(2))低于折叠良好的蛋白质的特征值。结合环区域的值甚至更低。有趣的是,在SGCI和SGTI中,应考虑化学交换(R(ex))项的残基分布显著不同。结合氢氘交换研究,这表明这两个密切相关分子的内部动力学不同。我们认为这些抑制剂的动态特性是决定其特异性的因素之一。

相似文献

1
Same fold with different mobility: backbone dynamics of small protease inhibitors from the desert locust, Schistocerca gregaria.具有不同流动性的相同折叠结构:沙漠蝗(Schistocerca gregaria)中小蛋白酶抑制剂的主链动力学
Biochemistry. 2004 Mar 30;43(12):3376-84. doi: 10.1021/bi035689+.
2
Comparative structure analysis of proteinase inhibitors from the desert locust, Schistocerca gregaria.
Eur J Biochem. 2002 Jan;269(2):527-37. doi: 10.1046/j.0014-2956.2001.02685.x.
3
Extended intermolecular interactions in a serine protease-canonical inhibitor complex account for strong and highly specific inhibition.丝氨酸蛋白酶-典型抑制剂复合物中的扩展分子间相互作用导致强烈且高度特异性的抑制作用。
J Mol Biol. 2005 Jul 1;350(1):156-69. doi: 10.1016/j.jmb.2005.04.039.
4
Proteinase inhibitors from desert locust, Schistocerca gregaria: engineering of both P(1) and P(1)' residues converts a potent chymotrypsin inhibitor to a potent trypsin inhibitor.
Biochim Biophys Acta. 1999 Sep 14;1434(1):143-50. doi: 10.1016/s0167-4838(99)00167-3.
5
Low molecular weight serine protease inhibitors from insects are proteins with highly conserved sequences.来自昆虫的低分子量丝氨酸蛋白酶抑制剂是具有高度保守序列的蛋白质。
Insect Biochem Mol Biol. 2000 Feb;30(2):145-52. doi: 10.1016/s0965-1748(99)00109-5.
6
Local binding with globally distributed changes in a small protease inhibitor upon enzyme binding.酶结合时一种小蛋白酶抑制剂中局部结合与全局分布变化。
FEBS J. 2006 Apr;273(8):1831-42. doi: 10.1111/j.1742-4658.2006.05204.x.
7
Selective inhibition of trypsins by insect peptides: role of P6-P10 loop.昆虫肽对胰蛋白酶的选择性抑制作用:P6 - P10环的作用
Biochemistry. 2003 Nov 25;42(46):13605-12. doi: 10.1021/bi035318t.
8
A novel locust (Schistocerca gregaria) serine protease inhibitor with a high affinity for neutrophil elastase.一种对中性粒细胞弹性蛋白酶具有高亲和力的新型蝗虫(沙漠蝗)丝氨酸蛋白酶抑制剂。
Biochem J. 2006 Dec 15;400(3):467-76. doi: 10.1042/BJ20060437.
9
Characterization of two novel pacifastin-like peptide precursor isoforms in the desert locust (Schistocerca gregaria): cDNA cloning, functional analysis and real-time RT-PCR gene expression studies.沙漠蝗(Schistocerca gregaria)中两种新型类pacifastin肽前体异构体的鉴定:cDNA克隆、功能分析及实时RT-PCR基因表达研究
Biochem J. 2005 May 15;388(Pt 1):281-9. doi: 10.1042/BJ20041414.
10
Molecular identification of SGPP-5, a novel pacifastin-like peptide precursor in the desert locust.沙漠蝗虫中一种新型类pacifastin肽前体SGPP-5的分子鉴定
Peptides. 2004 Jun;25(6):941-50. doi: 10.1016/j.peptides.2004.03.005.

引用本文的文献

1
Expression and purification of HER2 extracellular domain proteins in Schneider2 insect cells.HER2细胞外结构域蛋白在Schneider2昆虫细胞中的表达与纯化
Protein Expr Purif. 2016 Sep;125:26-33. doi: 10.1016/j.pep.2015.09.001. Epub 2015 Sep 9.
2
Monospecific inhibitors show that both mannan-binding lectin-associated serine protease-1 (MASP-1) and -2 Are essential for lectin pathway activation and reveal structural plasticity of MASP-2.单特异性抑制剂表明甘露聚糖结合凝集素相关丝氨酸蛋白酶-1(MASP-1)和 -2 对于凝集素途径的激活都是必不可少的,并且揭示了 MASP-2 的结构可塑性。
J Biol Chem. 2012 Jun 8;287(24):20290-300. doi: 10.1074/jbc.M112.354332. Epub 2012 Apr 16.
3
High affinity small protein inhibitors of human chymotrypsin C (CTRC) selected by phage display reveal unusual preference for P4' acidic residues.
噬菌体展示技术筛选的人糜蛋白酶 C(CTRC)高亲和力小蛋白抑制剂对 P4' 酸性残基表现出不寻常的偏好。
J Biol Chem. 2011 Jun 24;286(25):22535-45. doi: 10.1074/jbc.M111.235754. Epub 2011 Apr 22.
4
CoNSEnsX: an ensemble view of protein structures and NMR-derived experimental data.CoNSEnsX:蛋白质结构与核磁共振衍生实验数据的整合视图
BMC Struct Biol. 2010 Oct 29;10:39. doi: 10.1186/1472-6807-10-39.
5
Backbone dynamics of cyclotide MCoTI-I free and complexed with trypsin.环肽MCoTI-I游离态及与胰蛋白酶复合态的主链动力学
Angew Chem Int Ed Engl. 2010 Sep 17;49(39):7030-4. doi: 10.1002/anie.201002906.
6
Characterization of two novel pacifastin-like peptide precursor isoforms in the desert locust (Schistocerca gregaria): cDNA cloning, functional analysis and real-time RT-PCR gene expression studies.沙漠蝗(Schistocerca gregaria)中两种新型类pacifastin肽前体异构体的鉴定:cDNA克隆、功能分析及实时RT-PCR基因表达研究
Biochem J. 2005 May 15;388(Pt 1):281-9. doi: 10.1042/BJ20041414.