Szenthe Borbála, Gáspári Zoltán, Nagy Attila, Perczel András, Gráf László
Department of Biochemistry, Eötvös Loránd University, 1117 Pázmány Street 1/C, Budapest, Hungary.
Biochemistry. 2004 Mar 30;43(12):3376-84. doi: 10.1021/bi035689+.
SGCI (Schistocerca gregaria chymotrypsin inhibitor) and SGTI (Sch. gregaria trypsin inhibitor) are small, 35-residue serine protease inhibitors with intriguing taxon specificity: SGTI is specific for arthropod proteases while SGCI is an excellent inhibitor on both mammalian and arthropodal enzymes. Here we report the cloning, expression, and (15)N backbone dynamics investigations of these peptides. Successful expression could be achieved by a "dimeric" construct similar to the natural precursor of the inhibitors. An engineered methionine residue between the two modules served as a unique cyanogen bromide cleavage site to cleave the precursor and physically separate SGCI and SGTI. The overall correlation time of the precursor (5.29 ns) as well as the resulted SGCI (3.14 ns) and SGTI (2.96 ns) are as expected for proteins of this size. General order parameters (S(2)) for the inhibitors are lower than those characteristic of well-folded proteins. Values in the binding loop region are even lower. Interestingly, the distribution of residues for which a chemical exchange (R(ex)) term should be considered is strikingly different in SGCI and SGTI. Together with H-D exchange studies, this indicates that the internal dynamics of the two closely related molecules differ. We suggest that the dynamic properties of these inhibitors is one of the factors that determine their specificity.
沙漠蝗胰凝乳蛋白酶抑制剂(SGCI)和沙漠蝗胰蛋白酶抑制剂(SGTI)是由35个氨基酸残基组成的小型丝氨酸蛋白酶抑制剂,具有引人关注的分类群特异性:SGTI对节肢动物蛋白酶具有特异性,而SGCI对哺乳动物和节肢动物的酶都是一种优秀的抑制剂。在此,我们报告了这些肽段的克隆、表达及(15)N主链动力学研究。通过一种类似于抑制剂天然前体的“二聚体”构建体可实现成功表达。两个模块之间的一个工程化甲硫氨酸残基作为一个独特的溴化氰切割位点,用于切割前体并将SGCI和SGTI物理分离。前体(5.29纳秒)以及所得的SGCI(3.14纳秒)和SGTI(2.96纳秒)的整体相关时间与这种大小的蛋白质预期相符。抑制剂的一般序参数(S(2))低于折叠良好的蛋白质的特征值。结合环区域的值甚至更低。有趣的是,在SGCI和SGTI中,应考虑化学交换(R(ex))项的残基分布显著不同。结合氢氘交换研究,这表明这两个密切相关分子的内部动力学不同。我们认为这些抑制剂的动态特性是决定其特异性的因素之一。