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巨大芽孢杆菌基因工程的发展

Development of genetic engineering in Bacillus megaterium.

作者信息

Vary P

出版信息

Biotechnology. 1992;22:251-310.

PMID:1504589
Abstract

The opportunities for industrial genetic engineering in several species of Bacillus other than B. subtilis and B. thuringiensis are now becoming a reality. Many species have advantages for certain industrial applications, such as the lack of alkaline proteases, stable plasmid maintenance, and production of thermostable enzymes. It is now possible to increase production levels in many Bacillus strains that are already high producers of amylases, proteases, penicillinases, and penicillin amidases, by the introduction of such genes on high-copy-number plasmids. Possible problems in gene regulation, expression, limits on protein production, and secretion will be encountered, but recent reports on comparisons of expression of bacterial and eukaryotic genes in B. subtilis and B. megaterium (Shivakumar et al. 1989; Donovan et al. 1989a, 1989c; Ginsburgh et al. 1989) suggest that some species may prove to be better expression hosts for specific genes than others. What is needed is extensive comparative studies in promising species to better understand the parameters affecting cloning, gene expression, and protein secretion in the bacilli. In this chapter we have emphasized the development of genetic analysis and rDNA methods in B. megaterium. While the chromosomal map is still not a complete circle, many gene loci have been mapped, some with three-factor crosses, and have been characterized by enzyme assays (leu, trp, hem, cob, cbl) as well as complementation with B. subtilis genes (trp, dnaK, pur, met, ssp) E. coli genes (ATPase), hybridization (spoVG, abrB, sigK, ssp), and by growth on intermediates (trp, leu, thy, gua, ade, pur, pyr, his, arg). A mapping kit of 12 strains is available, and can facilitate the mapping of new mutations rapidly. This is of great advantage in strain construction since genes can be transferred at will by cotransduction. A partial physical map generated by pulse gel electrophoresis is also available (Muse 1990). It remains to be determined whether gene conversion occurs in B. megaterium as it does in B. subtilis. This is a powerful tool for rescuing genes and mutations of interest from the chromosome. There are now over 600 mutants available in our laboratory, over 100 in the laboratory of J.C. Vary, and several more that have been characterized in various laboratories throughout the world. Many of these are available in stock culture collections, although this source needs to be expanded. Mutants that should be useful for genetic engineering include recombination negative, protease negative, and plasmidless wild type, as well as Lac negative and several auxotrophs in the plasmidless background, and many sporulation negative mutants.

摘要

除枯草芽孢杆菌和苏云金芽孢杆菌外,其他几种芽孢杆菌用于工业基因工程的机会正逐渐成为现实。许多芽孢杆菌物种在某些工业应用方面具有优势,比如缺乏碱性蛋白酶、质粒维持稳定以及能产生耐热酶。现在,通过在高拷贝数质粒上引入相关基因,可以提高许多已经是淀粉酶、蛋白酶、青霉素酶和青霉素酰胺酶高产菌株的芽孢杆菌的产量。在基因调控、表达、蛋白质生产限制和分泌方面可能会遇到问题,但最近关于枯草芽孢杆菌和巨大芽孢杆菌中细菌和真核基因表达比较的报道(Shivakumar等人,1989年;Donovan等人,1989a,1989c;Ginsburgh等人,1989年)表明,对于特定基因而言,某些物种可能被证明是比其他物种更好的表达宿主。我们需要在有前景的物种中进行广泛的比较研究,以更好地了解影响芽孢杆菌克隆、基因表达和蛋白质分泌的参数。在本章中,我们重点介绍了巨大芽孢杆菌遗传分析和rDNA方法的发展。虽然染色体图谱仍未形成完整的环,但许多基因位点已被定位,有些是通过三因子杂交定位的,并且已通过酶分析(亮氨酸、色氨酸、血红素、钴胺素、钴胺酰胺)以及与枯草芽孢杆菌基因(色氨酸、dnaK、嘌呤、甲硫氨酸、ssp)、大肠杆菌基因(ATP酶)的互补、杂交(spoVG、abrB、sigK、ssp)以及在中间产物上生长(色氨酸、亮氨酸、胸腺嘧啶、鸟嘌呤、腺嘌呤、嘌呤、嘧啶、组氨酸、精氨酸)来进行表征。有一个包含12个菌株的定位试剂盒可供使用,它可以促进新突变的快速定位。这在菌株构建中具有很大优势,因为基因可以通过共转导随意转移。通过脉冲凝胶电泳生成的部分物理图谱也已可用(Muse,1990年)。巨大芽孢杆菌是否像枯草芽孢杆菌那样发生基因转换还有待确定。这是从染色体中拯救感兴趣的基因和突变的有力工具。目前我们实验室有600多个突变体,J.C. Vary实验室有100多个,并且在世界各地的不同实验室中还有其他几个已被表征的突变体。其中许多可以从保藏培养物中获得,尽管这个来源需要扩大。对基因工程有用的突变体包括重组阴性、蛋白酶阴性和无质粒野生型,以及无质粒背景下的乳糖阴性和几种营养缺陷型,还有许多芽孢形成阴性突变体。

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