Hahn Mark E, Karchner Sibel I, Franks Diana G, Merson Rebeka R
Biology Department, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts 02543-1049, USA.
Pharmacogenetics. 2004 Feb;14(2):131-43. doi: 10.1097/00008571-200402000-00007.
The aryl hydrocarbon receptor (AHR) gene encodes a ligand-activated transcription factor through which planar halogenated aromatic hydrocarbons (HAHs) such as 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) as well as polynuclear aromatic hydrocarbons (PAHs) cause altered gene expression and toxicity. To understand the role of AHR genetic variability in differential sensitivity to HAHs and PAHs, we are currently studying a population of the teleost Fundulus heteroclitus (Atlantic killifish) that has evolved genetic resistance to the toxic and biochemical effects of these compounds. Here, we report that the killifish AHR1 locus is highly polymorphic and that the frequencies of the major allele types differ between dioxin-sensitive and dioxin-resistant populations. Twenty-five single nucleotide polymorphisms (SNPs), nine of which are non-synonymous, were identified in the AHR1 coding sequence. Seven identified alleles were assigned to three groups, designated AHR11, AHR12 and AHR13. AHR11 alleles were under-represented in a population of dioxin- and polychlorinated biphenyl (PCB)-resistant fish from a PCB-contaminated Superfund site (New Bedford Harbor, Massachusetts, USA) compared to dioxin-sensitive fish from a less contaminated reference site (Scorton Creek, Massachusetts, USA). To determine the possible role of these AHR1 variants in differential HAH sensitivity, we expressed representative variant proteins from the two most divergent allelic groups (AHR11 and AHR13) by in-vitro transcription and translation and assessed their functional properties. AHR11A and AHR13A proteins displayed similar binding capacities and affinities for [H]TCDD. In transient transfection assays using mammalian cells, AHR11A and AHR13A exhibited similar abilities to support TCDD-dependent transactivation of a luciferase reporter gene under control of AHR-responsive enhancer elements. We discuss the possibility of other functional differences in AHR1 variants or their interaction with other killifish loci (AHR2, AHRR) that may contribute to differences in dioxin sensitivity.
芳烃受体(AHR)基因编码一种配体激活的转录因子,通过该因子,诸如2,3,7,8-四氯二苯并对二恶英(TCDD)等平面卤代芳烃(HAHs)以及多环芳烃(PAHs)会导致基因表达改变和毒性。为了解AHR基因变异性在对HAHs和PAHs的差异敏感性中的作用,我们目前正在研究硬骨鱼Fundulus heteroclitus(大西洋鳉鱼)群体,该群体已进化出对这些化合物的毒性和生化效应的遗传抗性。在此,我们报告鳉鱼AHR1基因座高度多态,并且主要等位基因类型的频率在二恶英敏感和二恶英抗性群体之间存在差异。在AHR1编码序列中鉴定出25个单核苷酸多态性(SNP),其中9个是非同义的。鉴定出的7个等位基因被分为三组,分别命名为AHR11、AHR12和AHR13。与来自污染程度较低的参考地点(美国马萨诸塞州斯科顿溪)的二恶英敏感鱼类相比,来自受多氯联苯(PCB)污染的超级基金场地(美国马萨诸塞州新贝德福德港)的对二恶英和多氯联苯具有抗性的鱼类群体中,AHR11等位基因的比例较低。为了确定这些AHR1变体在HAH差异敏感性中的可能作用,我们通过体外转录和翻译表达了来自两个差异最大的等位基因组(AHR11和AHR13)的代表性变体蛋白,并评估了它们的功能特性。AHR11A和AHR13A蛋白对[H]TCDD显示出相似的结合能力和亲和力。在使用哺乳动物细胞的瞬时转染试验中,AHR11A和AHR13A在AHR反应增强子元件控制下支持萤光素酶报告基因的TCDD依赖性反式激活的能力相似。我们讨论了AHR1变体中其他功能差异或它们与其他鳉鱼基因座(AHR2、AHRR)相互作用的可能性,这些可能导致二恶英敏感性的差异。