• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在秀丽隐杆线虫中,内含子大小与重组率呈正相关。

Intron size correlates positively with recombination rate in Caenorhabditis elegans.

作者信息

Prachumwat Anuphap, DeVincentis Laura, Palopoli Michael F

机构信息

Department of Biology, Bowdoin College, Brunswick, Maine 04011, USA.

出版信息

Genetics. 2004 Mar;166(3):1585-90. doi: 10.1534/genetics.166.3.1585.

DOI:10.1534/genetics.166.3.1585
PMID:15082572
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1470791/
Abstract

A negative correlation between intron size and recombination rate has been reported for the Drosophila melanogaster and human genomes. Population-genetic models suggest that this pattern could be caused by an interaction between recombination rate and the efficacy of natural selection. To test this idea, we examined variation in intron size and recombination rate across the genome of the nematode Caenorhabditis elegans. Interestingly, we found that intron size correlated positively with recombination rate in this species.

摘要

据报道,在黑腹果蝇和人类基因组中,内含子大小与重组率之间存在负相关。群体遗传学模型表明,这种模式可能是由重组率与自然选择效力之间的相互作用导致的。为了验证这一观点,我们研究了秀丽隐杆线虫基因组中内含子大小和重组率的变化。有趣的是,我们发现该物种的内含子大小与重组率呈正相关。

相似文献

1
Intron size correlates positively with recombination rate in Caenorhabditis elegans.在秀丽隐杆线虫中,内含子大小与重组率呈正相关。
Genetics. 2004 Mar;166(3):1585-90. doi: 10.1534/genetics.166.3.1585.
2
Hill-Robertson interference is a minor determinant of variations in codon bias across Drosophila melanogaster and Caenorhabditis elegans genomes.希尔-罗伯逊干扰是果蝇和秀丽隐杆线虫基因组密码子偏好性变异的一个次要决定因素。
Mol Biol Evol. 2002 Sep;19(9):1399-406. doi: 10.1093/oxfordjournals.molbev.a004203.
3
Does recombination improve selection on codon usage? Lessons from nematode and fly complete genomes.重组是否能改善对密码子使用的选择?来自线虫和果蝇全基因组的经验教训。
Proc Natl Acad Sci U S A. 2001 May 8;98(10):5688-92. doi: 10.1073/pnas.091427698. Epub 2001 Apr 24.
4
Selection at linked sites in the partial selfer Caenorhabditis elegans.秀丽隐杆线虫部分自体受精者中连锁位点的选择。
Mol Biol Evol. 2003 May;20(5):665-73. doi: 10.1093/molbev/msg072. Epub 2003 Apr 2.
5
The correlation between intron length and recombination in drosophila. Dynamic equilibrium between mutational and selective forces.果蝇内含子长度与重组之间的相关性。突变力与选择力之间的动态平衡。
Genetics. 2000 Nov;156(3):1175-90. doi: 10.1093/genetics/156.3.1175.
6
Transposons but not retrotransposons are located preferentially in regions of high recombination rate in Caenorhabditis elegans.在秀丽隐杆线虫中,转座子而非反转录转座子优先位于高重组率区域。
Genetics. 2000 Dec;156(4):1661-9. doi: 10.1093/genetics/156.4.1661.
7
Mystery of intron gain.内含子获得之谜。
Genome Res. 2003 Oct;13(10):2236-41. doi: 10.1101/gr.1029803. Epub 2003 Sep 15.
8
Genome-wide analysis of recombination machinery for spliceosomal introns gain.基因组范围内对剪接体内含子获得的重组机制进行分析。
Mol Biol Rep. 2010 Mar;37(3):1551-7. doi: 10.1007/s11033-009-9557-8. Epub 2009 May 17.
9
Chromosome-scale selective sweeps shape Caenorhabditis elegans genomic diversity.染色体尺度的选择清除塑造秀丽隐杆线虫基因组多样性。
Nat Genet. 2012 Jan 29;44(3):285-90. doi: 10.1038/ng.1050.
10
Natural selection shapes nucleotide polymorphism across the genome of the nematode Caenorhabditis briggsae.自然选择塑造了线虫秀丽隐杆线虫基因组中核苷酸多态性。
Genome Res. 2010 Aug;20(8):1103-11. doi: 10.1101/gr.104331.109. Epub 2010 May 27.

引用本文的文献

1
Intragenomic conflict associated with extreme phenotypic plasticity in queen-worker caste determination in honey bees (Apis mellifera).蜜蜂(西方蜜蜂)蜂后-工蜂级型决定中与极端表型可塑性相关的基因组内冲突。
Genome Biol. 2025 Jun 18;26(1):171. doi: 10.1186/s13059-025-03628-0.
2
Chromosome segregation during spermatogenesis occurs through a unique center-kinetic mechanism in holocentric moth species.在全着丝粒的鳞翅目昆虫中,精子发生过程中的染色体分离通过一种独特的中心动力学机制发生。
PLoS Genet. 2024 Jun 24;20(6):e1011329. doi: 10.1371/journal.pgen.1011329. eCollection 2024 Jun.
3
The fine-scale recombination rate variation and associations with genomic features in a butterfly.蝴蝶中精细尺度重组率的变化及其与基因组特征的关联。
Genome Res. 2023 May;33(5):810-823. doi: 10.1101/gr.277414.122. Epub 2023 Jun 12.
4
Chloroplast genomes of two Pueraria DC. species: sequencing, comparative analysis and molecular marker development.两种植食豆属植物叶绿体基因组的测序、比较分析与分子标记开发。
FEBS Open Bio. 2022 Feb;12(2):349-361. doi: 10.1002/2211-5463.13335. Epub 2021 Dec 26.
5
Chromosome-Level Assembly of the Genome Reveals Conserved Patterns of Nematode Genome Organization.染色体水平组装揭示了线虫基因组组织的保守模式。
Genetics. 2020 Apr;214(4):769-780. doi: 10.1534/genetics.119.303018. Epub 2020 Feb 28.
6
Mapping the dsRNA World.绘制 dsRNA 世界图谱。
Cold Spring Harb Perspect Biol. 2019 Mar 1;11(3):a035352. doi: 10.1101/cshperspect.a035352.
7
Genomic changes following the reversal of a Y chromosome to an autosome in Drosophila pseudoobscura.在拟暗果蝇中,Y染色体转变为常染色体后发生的基因组变化。
Evolution. 2017 May;71(5):1285-1296. doi: 10.1111/evo.13229. Epub 2017 Apr 10.
8
Genome-wide profiling of the C. elegans dsRNAome.秀丽隐杆线虫双链RNA组的全基因组分析。
RNA. 2015 May;21(5):786-800. doi: 10.1261/rna.048801.114. Epub 2015 Mar 24.
9
Higher frequency of intron loss from the promoter proximally paused genes of Drosophila melanogaster.黑腹果蝇启动子近端暂停基因的内含子丢失频率更高。
Fly (Austin). 2014;8(2):120-5. doi: 10.4161/fly.29489.
10
Recent selection on the Y-to-dot translocation in Drosophila pseudoobscura.果蝇伪暗果蝇Y染色体到点状染色体易位的近期选择
Mol Biol Evol. 2014 Apr;31(4):846-56. doi: 10.1093/molbev/msu002. Epub 2014 Jan 3.

本文引用的文献

1
Eukaryotic intron loss.真核生物内含子丢失
Science. 2003 May 30;300(5624):1393. doi: 10.1126/science.1080559.
2
Hill-Robertson interference is a minor determinant of variations in codon bias across Drosophila melanogaster and Caenorhabditis elegans genomes.希尔-罗伯逊干扰是果蝇和秀丽隐杆线虫基因组密码子偏好性变异的一个次要决定因素。
Mol Biol Evol. 2002 Sep;19(9):1399-406. doi: 10.1093/oxfordjournals.molbev.a004203.
3
Selection for short introns in highly expressed genes.在高表达基因中选择短内含子。
Nat Genet. 2002 Aug;31(4):415-8. doi: 10.1038/ng940. Epub 2002 Jul 22.
4
Population, evolutionary and genomic consequences of interference selection.干扰选择的群体、进化和基因组后果。
Genetics. 2002 May;161(1):389-410. doi: 10.1093/genetics/161.1.389.
5
Spatial organization of active and inactive genes and noncoding DNA within chromosome territories.染色体区域内活性基因、非活性基因和非编码DNA的空间组织。
J Cell Biol. 2002 May 13;157(4):579-89. doi: 10.1083/jcb.200111071. Epub 2002 May 6.
6
Alternative splicing: multiple control mechanisms and involvement in human disease.可变剪接:多种调控机制及其与人类疾病的关联
Trends Genet. 2002 Apr;18(4):186-93. doi: 10.1016/s0168-9525(01)02626-9.
7
Evolutionary conservation of chromosome territory arrangements in cell nuclei from higher primates.高等灵长类动物细胞核中染色体区域排列的进化保守性。
Proc Natl Acad Sci U S A. 2002 Apr 2;99(7):4424-9. doi: 10.1073/pnas.072618599.
8
Selective constraint in intergenic regions of human and mouse genomes.人类和小鼠基因组基因间区域的选择限制
Trends Genet. 2001 Jul;17(7):373-6. doi: 10.1016/s0168-9525(01)02344-7.
9
Does recombination improve selection on codon usage? Lessons from nematode and fly complete genomes.重组是否能改善对密码子使用的选择?来自线虫和果蝇全基因组的经验教训。
Proc Natl Acad Sci U S A. 2001 May 8;98(10):5688-92. doi: 10.1073/pnas.091427698. Epub 2001 Apr 24.
10
Chromosome territories, nuclear architecture and gene regulation in mammalian cells.哺乳动物细胞中的染色体领地、核结构与基因调控
Nat Rev Genet. 2001 Apr;2(4):292-301. doi: 10.1038/35066075.