Greenblatt C L, Baum J, Klein B Y, Nachshon S, Koltunov V, Cano R J
Kuvin Centre for the Study of Infectious and Tropical Disease, The Hebrew University-Hadassah School of Medicine, P.O. Box 12272, 91120 Jerusalem, Israel.
Microb Ecol. 2004 Jul;48(1):120-7. doi: 10.1007/s00248-003-2016-5. Epub 2004 May 28.
A growing body of evidence now supports the isolation of microorganisms from ancient materials. However, questions about the stringency of extraction methods and the genetic relatedness of isolated organisms to their closest living relatives continue to challenge the authenticity of these ancient life forms. Previous studies have successfully isolated a number of spore-forming bacteria from organic and inorganic deposits of considerable age whose survival is explained by their ability to enter suspended animation for extended periods of time. However, despite a number of putative reports, the isolation of non-spore-forming bacteria and an explanation for their survival have remained enigmatic. Here we describe the isolation of non-spore-forming cocci from a 120-million-year-old block of amber, which by genetic, morphological, and biochemical analyses are identified as belonging to the bacterial species Micrococcus luteus. Although comparison of 16S rRNA sequences from the ancient isolates with their modern counterparts is unable to confirm the precise age of these bacteria, we demonstrate, using complementary molecular and cell biological techniques, evidence supporting the view that these (and related modern members of the genus) have numerous adaptations for survival in extreme, nutrient-poor environments, traits that will assist in this bacteria's persistence and dispersal in the environment. The bacteria's ability to utilize succinic acid and process terpine-related compounds, both major components of natural amber, support its survival in this oligotrophic environment.
越来越多的证据支持从古代材料中分离微生物。然而,关于提取方法的严格性以及分离出的生物体与其现存最近亲缘关系的遗传相关性问题,继续对这些古代生命形式的真实性构成挑战。先前的研究已成功地从年代久远的有机和无机沉积物中分离出多种形成孢子的细菌,它们能够长时间进入假死状态,以此来解释其生存能力。然而,尽管有许多假定的报告,但非形成孢子细菌的分离及其生存原因仍然成谜。在此,我们描述了从一块有着1.2亿年历史的琥珀中分离出非形成孢子的球菌,通过遗传、形态和生化分析,确定其属于细菌物种藤黄微球菌。尽管将古代分离株的16S rRNA序列与其现代对应序列进行比较无法确定这些细菌的确切年代,但我们使用互补的分子和细胞生物学技术证明,有证据支持这样一种观点,即这些细菌(以及该属的相关现代成员)具有许多在极端、营养贫乏环境中生存的适应性特征,这些特征将有助于这种细菌在环境中的持续存在和传播。这种细菌利用琥珀酸和处理与萜烯相关化合物的能力,这两者都是天然琥珀的主要成分,支持了其在这种贫营养环境中的生存。