Fries Ryan S, Mahboubi Payam, Mahapatra Nitish R, Mahata Sushil K, Schork Nicholas J, Schmid-Schoenbein Geert W, O'Connor Daniel T
Department of Bioengineering, University of California at San Diego, San Diego, Calif 92161, USA.
Hypertension. 2004 Jun;43(6):1301-11. doi: 10.1161/01.HYP.0000127708.96195.E6.
The genetic basis of hypertension in the genetically/hereditary hypertensive (BPH/2) mouse strain is incompletely understood, although a recent genome scan uncovered evidence for several susceptibility loci. To probe the neuroendocrine transcriptome in this disease model, 12 488 probe set microarray experiments were performed on mRNA transcripts from adrenal glands of juvenile (prehypertensive) and adult BPH/2 (hypertensive), as well as the genetically/hereditary low-blood pressure (BPL/1), strains at both time points. To determine the impact of strain (BPH/2 versus BPL/1), age (juvenile versus adult), and the interaction of strain and age on gene expression levels, we performed standard 2-factor ANOVA and computed a concordance coefficient to assess the reproducibility of gene expression measurements among replicates. Of genes with significant (P<0.05) differential expression, 2647 showed strain differences, 982 showed age differences, and 757 exhibited strain-by-age interaction. Fold-changes in gene expression assayed by microarray were confirmed in a subset by real-time polymerase chain reaction (R=0.739, P=0.0094). We used a systems biology approach to evaluate alterations in contributing biochemical pathways and we statistically quantified these global pathway disturbances using the Kolmogorov-Smirnov goodness-of-fit test. We found widespread, indeed global, alterations in patterns of gene expression in diverse systems of BPH/2: in sympathochromaffin transcripts suggesting increased sympathetic stimulation; in vasoconstrictor/vasodilator systems; global reductions in carbohydrate intermediary metabolism; and increases in oxidative stress, with changes in oxygen radical forming and disposition enzymes. These analyses highlight widespread derangements in diverse physiological pathways, providing multiple avenues for further investigation into the pathogenesis of genetic hypertension.
尽管最近的全基因组扫描发现了几个易感基因座的证据,但对于遗传性高血压(BPH/2)小鼠品系中高血压的遗传基础仍未完全了解。为了探究该疾病模型中的神经内分泌转录组,我们对幼年(高血压前期)和成年BPH/2(高血压)小鼠以及遗传性低血压(BPL/1)小鼠品系在两个时间点的肾上腺mRNA转录本进行了12488个探针集的微阵列实验。为了确定品系(BPH/2与BPL/1)、年龄(幼年与成年)以及品系和年龄的相互作用对基因表达水平的影响,我们进行了标准的双因素方差分析,并计算了一致性系数以评估重复实验中基因表达测量的可重复性。在具有显著(P<0.05)差异表达的基因中,2647个显示出品系差异,982个显示出年龄差异,757个表现出品系与年龄的相互作用。通过实时聚合酶链反应在一个子集中证实了微阵列检测的基因表达倍数变化(R=0.739,P=0.0094)。我们使用系统生物学方法评估相关生化途径的改变,并使用柯尔莫哥洛夫-斯米尔诺夫拟合优度检验对这些全局途径紊乱进行统计学量化。我们发现BPH/2不同系统中的基因表达模式存在广泛的、实际上是全局性的改变:在交感嗜铬细胞转录本中提示交感神经刺激增加;在血管收缩/舒张系统中;碳水化合物中间代谢的全局降低;以及氧化应激增加,伴有氧自由基形成和代谢酶的变化。这些分析突出了不同生理途径中的广泛紊乱,为进一步研究遗传性高血压的发病机制提供了多条途径。