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莽草酸途径变体的创建。

Creation of a shikimate pathway variant.

作者信息

Ran Ningqing, Draths K M, Frost J W

机构信息

Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, USA.

出版信息

J Am Chem Soc. 2004 Jun 9;126(22):6856-7. doi: 10.1021/ja049730n.

DOI:10.1021/ja049730n
PMID:15174841
Abstract

The competition between the Escherichia coli carbohydrate phosphotransferase system and 3-deoxy-d-arabino-heptulosonate 7-phosphate (DAHP) synthase for phosphoenolpyruvate limits the concentration and yield of natural products microbially synthesized via the shikimate pathway. To circumvent this competition for phosphoenolpyruvate, a shikimate pathway variant has been created. 2-Keto-3-deoxy-6-phosphogalactonate (KDPGal) aldolases encoded by Escherichia coli dgoA and Klebsiella pneumoniae dgoA are subjected to directed evolution. The evolved KDPGal aldolase isozymes exhibit 4-8-fold higher specific activities relative to that for native KDPGal aldolase with respect to catalyzing the condensation of pyruvate and d-erythrose 4-phosphate to produce DAHP. To probe the ability of the created shikimate pathway variant to support microbial growth and metabolism, growth rates and synthesis of 3-dehydroshikimate are examined for E. coli constructs that lack phosphoenolpruvate-based DAHP synthase activity and rely on evolved KDPGal aldolase for biosynthesis of shikimate pathway intermediates and products.

摘要

大肠杆菌碳水化合物磷酸转移酶系统与3-脱氧-D-阿拉伯庚酮糖酸-7-磷酸(DAHP)合酶对磷酸烯醇丙酮酸的竞争限制了通过莽草酸途径微生物合成的天然产物的浓度和产量。为了规避对磷酸烯醇丙酮酸的这种竞争,已创建了一种莽草酸途径变体。对大肠杆菌dgoA和肺炎克雷伯菌dgoA编码的2-酮-3-脱氧-6-磷酸半乳糖酸(KDPGal)醛缩酶进行定向进化。相对于天然KDPGal醛缩酶,进化后的KDPGal醛缩酶同工酶在催化丙酮酸和D-赤藓糖-4-磷酸缩合以产生DAHP方面表现出高4至8倍的比活性。为了探究所创建的莽草酸途径变体支持微生物生长和代谢的能力,对缺乏基于磷酸烯醇丙酮酸的DAHP合酶活性并依赖进化后的KDPGal醛缩酶进行莽草酸途径中间体和产物生物合成的大肠杆菌构建体的生长速率和3-脱氢莽草酸的合成进行了研究。

相似文献

1
Creation of a shikimate pathway variant.莽草酸途径变体的创建。
J Am Chem Soc. 2004 Jun 9;126(22):6856-7. doi: 10.1021/ja049730n.
2
Directed evolution of 2-keto-3-deoxy-6-phosphogalactonate aldolase to replace 3-deoxy-D-arabino-heptulosonic acid 7-phosphate synthase.2-酮-3-脱氧-6-磷酸半乳糖醛酸醛缩酶的定向进化以取代7-磷酸-3-脱氧-D-阿拉伯庚酮糖酸合成酶。
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Altered glucose transport and shikimate pathway product yields in E. coli.大肠杆菌中葡萄糖转运和莽草酸途径产物产量的改变
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Modulation of phosphoenolpyruvate synthase expression increases shikimate pathway product yields in E. coli.磷酸烯醇丙酮酸合酶表达的调控提高了大肠杆菌中莽草酸途径产物的产量。
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Phosphoenolpyruvate availability and the biosynthesis of shikimic acid.磷酸烯醇丙酮酸的可用性与莽草酸的生物合成
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Fluorine-containing analogues of intermediates in the Shikimate pathway.莽草酸途径中间体的含氟类似物。
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Characterization and crystal structure of Escherichia coli KDPGal aldolase.大肠杆菌KDPGal醛缩酶的表征及晶体结构
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Pulse experiments as a prerequisite for the quantification of in vivo enzyme kinetics in aromatic amino acid pathway of Escherichia coli.脉冲实验作为定量大肠杆菌芳香族氨基酸途径体内酶动力学的先决条件。
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Planta. 2002 Nov;216(1):129-35. doi: 10.1007/s00425-002-0908-0. Epub 2002 Nov 12.

引用本文的文献

1
Novel technologies combined with traditional metabolic engineering strategies facilitate the construction of shikimate-producing Escherichia coli.新型技术与传统代谢工程策略相结合,促进了芳香族氨基酸生产大肠杆菌的构建。
Microb Cell Fact. 2017 Sep 29;16(1):167. doi: 10.1186/s12934-017-0773-y.
2
Global genome analysis of the shikimic acid pathway reveals greater gene loss in host-associated than in free-living bacteria.全球莽草酸途径的基因组分析表明,与自由生活的细菌相比,宿主相关的细菌基因丢失更多。
BMC Genomics. 2010 Nov 11;11:628. doi: 10.1186/1471-2164-11-628.
3
Directed evolution of aldolases for exploitation in synthetic organic chemistry.
用于合成有机化学的醛缩酶的定向进化
Arch Biochem Biophys. 2008 Jun 15;474(2):318-30. doi: 10.1016/j.abb.2008.01.005. Epub 2008 Jan 19.
4
Characterization and crystal structure of Escherichia coli KDPGal aldolase.大肠杆菌KDPGal醛缩酶的表征及晶体结构
Bioorg Med Chem. 2008 Jan 15;16(2):710-20. doi: 10.1016/j.bmc.2007.10.043. Epub 2007 Oct 18.
5
Mechanism of the Class I KDPG aldolase.I类2-酮-3-脱氧-6-磷酸葡萄糖酸醛缩酶的作用机制。
Bioorg Med Chem. 2006 May 1;14(9):3002-10. doi: 10.1016/j.bmc.2005.12.022. Epub 2006 Jan 5.