Bedard Kristin M, Walter Brandon L, Semler Bert L
Department of Microbiology and Molecular Genetics, College of Medicine, University of California, Irvine 92697, USA.
RNA. 2004 Aug;10(8):1266-76. doi: 10.1261/rna.7070304. Epub 2004 Jul 9.
The cellular protein, poly(rC) binding protein 2 (PCBP2), is known to function in picornavirus cap-independent translation. We have further examined the RNA binding properties and protein-protein interactions of PCBP2 necessary for translation. We have studied its putative multimerization properties utilizing the yeast two-hybrid assay and in vitro biochemical methods, including glutathione S-transferase (GST) pull-down assays and gel filtration. Through genetic analysis, the multimerization domain has been localized to the second K-homologous (KH) RNA binding domain of the protein between amino acids 125 and 158. To examine the function of multimerization in poliovirus translation, we utilized the truncated protein, DeltaKH1-PCBP2, which is capable of multimer formation, but does not bind poliovirus stem-loop IV RNA (an interaction required for translation). Utilizing RNA binding and in vitro translation assays, this protein was shown to act as a dominant negative, suggesting that PCBP2 multimerization functions in poliovirus translation and RNA binding. Additionally, PCBP2 containing a deletion in the multimerization domain (DeltaKH2-PCBP2) was not able to bind poliovirus stem-loop IV RNA and could not rescue translation in extracts that were depleted of endogenous PCBP2. Results from these experiments suggest that the multimerization of PCBP2 is required for efficient RNA binding and cap-independent translation of poliovirus RNA. By examining the functional interactions of the cellular protein PCBP2, we have discovered a novel determinant in the mechanism of picornavirus cap-independent translation.
细胞蛋白多聚(rC)结合蛋白2(PCBP2)已知在微小核糖核酸病毒非帽依赖性翻译中发挥作用。我们进一步研究了PCBP2在翻译过程中所需的RNA结合特性和蛋白质-蛋白质相互作用。我们利用酵母双杂交试验和体外生化方法,包括谷胱甘肽S-转移酶(GST)下拉试验和凝胶过滤,研究了其假定的多聚化特性。通过基因分析,多聚化结构域已定位到该蛋白第125至158位氨基酸之间的第二个K-同源(KH)RNA结合结构域。为了研究多聚化在脊髓灰质炎病毒翻译中的功能,我们使用了截短蛋白DeltaKH1-PCBP2,它能够形成多聚体,但不结合脊髓灰质炎病毒茎环IV RNA(翻译所需的相互作用)。利用RNA结合和体外翻译试验,该蛋白显示出显性负作用,表明PCBP2多聚化在脊髓灰质炎病毒翻译和RNA结合中起作用。此外,在多聚化结构域中存在缺失的PCBP2(DeltaKH2-PCBP2)不能结合脊髓灰质炎病毒茎环IV RNA,也不能挽救内源性PCBP2耗尽的提取物中的翻译。这些实验结果表明,PCBP2的多聚化是脊髓灰质炎病毒RNA有效结合和非帽依赖性翻译所必需的。通过研究细胞蛋白PCBP2的功能相互作用,我们在微小核糖核酸病毒非帽依赖性翻译机制中发现了一个新的决定因素。