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通过核糖体展示和mRNA展示进行体外蛋白质进化。

In-vitro protein evolution by ribosome display and mRNA display.

作者信息

Lipovsek Dasa, Plückthun Andreas

机构信息

Biological Engineering Division, Massachusetts Institute of Technology, Cambridge 02139, USA.

出版信息

J Immunol Methods. 2004 Jul;290(1-2):51-67. doi: 10.1016/j.jim.2004.04.008.

Abstract

In-vitro display technologies combine two important advantages for identifying and optimizing ligands by evolutionary strategies. First, by obviating the need to transform cells in order to generate and select libraries, they allow a much higher library diversity. Second, by including PCR as an integral step in the procedure, they make PCR-based mutagenesis strategies convenient. The resulting iteration between diversification and selection allows true Darwinian protein evolution to occur in vitro. We describe two such selection methods, ribosome display and mRNA display. In ribosome display, the translated protein remains connected to the ribosome and to its encoding mRNA; the resulting ternary complex is used for selection. In mRNA display, mRNA is first translated and then covalently bonded to the protein it encodes, using puromycin as an adaptor molecule. The covalent mRNA-protein adduct is purified from the ribosome and used for selection. Successful examples of high-affinity, specific target-binding molecules selected by in-vitro display methods include peptides, antibodies, enzymes, and engineered scaffolds, such as fibronectin type III domains and synthetic ankyrins, which can mimic antibody function.

摘要

体外展示技术结合了通过进化策略鉴定和优化配体的两个重要优势。首先,通过无需转化细胞来生成和选择文库,它们允许更高的文库多样性。其次,通过将聚合酶链式反应(PCR)作为该过程的一个组成步骤,它们使基于PCR的诱变策略变得方便。多样化和选择之间的最终迭代允许真正的达尔文式蛋白质进化在体外发生。我们描述两种这样的选择方法,核糖体展示和mRNA展示。在核糖体展示中,翻译后的蛋白质仍然与核糖体及其编码的mRNA相连;产生的三元复合物用于选择。在mRNA展示中,mRNA首先被翻译,然后使用嘌呤霉素作为衔接分子与它编码的蛋白质共价结合。共价的mRNA-蛋白质加合物从核糖体中纯化出来并用于选择。通过体外展示方法选择的高亲和力、特异性靶标结合分子的成功例子包括肽、抗体、酶和工程化支架,如III型纤连蛋白结构域和合成锚蛋白,它们可以模拟抗体功能。

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