Graether Steffen P, Sykes Brian D
CIHR Group in Protein Structure and Function, Department of Biochemistry and Protein Engineering Network of Centres of Excellence, University of Alberta, Edmonton, Alberta, Canada.
Eur J Biochem. 2004 Aug;271(16):3285-96. doi: 10.1111/j.1432-1033.2004.04256.x.
Antifreeze proteins (AFPs) designate a class of proteins that are able to bind to and inhibit the growth of macromolecular ice. These proteins have been characterized from a variety of organisms. Recently, the structures of AFPs from the spruce budworm (Choristoneura fumiferana) and the yellow mealworm (Tenebrio molitor) have been determined by NMR and X-ray crystallography. Despite nonhomologous sequences, both proteins were shown to consist of beta-helices. We review the structures and dynamics data of these two insect AFPs to bring insight into the structure-function relationship and explore their beta-helical architecture. For the spruce budworm protein, the fold is a left-handed beta-helix with 15 residues per coil. The Tenebrio molitor protein consists of a right-handed beta-helix with 12 residues per coil. Mutagenesis and structural studies show that the insect AFPs present a highly rigid array of threonine residues and bound water molecules that can effectively mimic the ice lattice. Comparisons of the newly determined ryegrass and carrot AFP sequences have led to models suggesting that they might also consist of beta-helices, and indicate that the beta-helix might be used as an AFP structural motif in nonfish organisms.
抗冻蛋白(AFPs)是一类能够结合并抑制大分子冰晶生长的蛋白质。这些蛋白质已在多种生物体中得到鉴定。最近,通过核磁共振(NMR)和X射线晶体学确定了云杉芽虫(Choristoneura fumiferana)和黄粉虫(Tenebrio molitor)的抗冻蛋白结构。尽管序列不同源,但这两种蛋白质均显示由β-螺旋组成。我们回顾这两种昆虫抗冻蛋白的结构和动力学数据,以深入了解其结构-功能关系,并探索它们的β-螺旋结构。对于云杉芽虫的蛋白质,其折叠结构是一个左手β-螺旋,每圈有15个残基。黄粉虫的蛋白质由一个右手β-螺旋组成,每圈有12个残基。诱变和结构研究表明,昆虫抗冻蛋白呈现出由苏氨酸残基和结合水分子组成的高度刚性阵列,能够有效地模拟冰晶格。对新测定的黑麦草和胡萝卜抗冻蛋白序列的比较得出了一些模型,表明它们可能也由β-螺旋组成,并表明β-螺旋可能作为非鱼类生物体中的抗冻蛋白结构基序。