Graether Steffen P, Gagné Stéphane M, Spyracopoulos Leo, Jia Zongchao, Davies Peter L, Sykes Brian D
Department of Biochemistry, CIHR Group in Structure and Function, University of Alberta, 713, Heritage Medical Research Building, T6G 2H7, Edmonton, Alta., Canada.
J Mol Biol. 2003 Apr 11;327(5):1155-68. doi: 10.1016/s0022-2836(03)00235-3.
Antifreeze proteins (AFPs) prevent the growth of ice, and are used by some organisms that live in sub-zero environments for protection against freezing. All AFPs are thought to function by an adsorption inhibition process. In order to elucidate the ice-binding mechanism, the structures of several AFPs have been determined, and have been shown to consist of different folds. Recently, the first structures of the highly active insect AFPs have been characterized. These proteins have a beta-helix structure, which adds yet another fold to the AFP family. The 90-residue spruce budworm (Choristoneura fumiferana) AFP consists of a beta-helix with 15 residues per coil. The structure contains two ranks of aligned threonine residues (known as the TXT motif), which were shown by mutagenesis experiments to be located in the ice-binding face. In our previous NMR study of this AFP at 30 degrees C, we found that the TXT face was not optimally defined because of the broadening of NMR resonances potentially due to weak oligomerization. We present here a structure of spruce budworm AFP determined at 5 degrees C, where this broadening is reduced. In addition, the 1H-15N NMR dynamics of the protein were examined at 30 degrees C and 5 degrees C. The results show that the spruce budworm AFP is more structured at 5 degrees C, and support the general observation that AFPs become more rigid as the temperature is lowered.
抗冻蛋白(AFPs)可阻止冰的生长,一些生活在零度以下环境中的生物利用它们来防止结冰。所有抗冻蛋白都被认为是通过吸附抑制过程发挥作用的。为了阐明冰结合机制,已确定了几种抗冻蛋白的结构,结果表明它们具有不同的折叠结构。最近,高活性昆虫抗冻蛋白的首批结构已得到表征。这些蛋白具有β-螺旋结构,这为抗冻蛋白家族增添了另一种折叠结构。含有90个氨基酸残基的云杉芽卷叶蛾(Choristoneura fumiferana)抗冻蛋白由每个螺旋包含15个残基的β-螺旋组成。该结构包含两排对齐的苏氨酸残基(称为TXT基序),诱变实验表明这些残基位于冰结合面上。在我们之前于30℃对该抗冻蛋白进行的核磁共振研究中,我们发现由于核磁共振信号的展宽(可能是由于弱寡聚化),TXT面的定义并不理想。我们在此展示了在5℃下测定的云杉芽卷叶蛾抗冻蛋白的结构,此时这种展宽现象有所减少。此外,还在30℃和5℃下检测了该蛋白的1H-15N核磁共振动力学。结果表明,云杉芽卷叶蛾抗冻蛋白在5℃时结构更有序,这支持了一个普遍的观察结果,即随着温度降低,抗冻蛋白会变得更加刚性。