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单斜晶系鸡蛋白溶菌酶的研究。IV. 1.8埃分辨率下的X射线精修及多晶型可变区的比较

Studies of monoclinic hen egg-white lysozyme. IV. X-ray refinement at 1.8 A resolution and a comparison of the variable regions in the polymorphic forms.

作者信息

Rao S T, Sundaralingam M

机构信息

Laboratory of Biological Macromolecular Structure, Department of Chemistry, The Ohio State University, Columbus 43210, USA.

出版信息

Acta Crystallogr D Biol Crystallogr. 1996 Jan 1;52(Pt 1):170-5. doi: 10.1107/S0907444995009504.

Abstract

Monoclinic crystals of hen egg-white lysozyme (E.C. 3.2.1.17, HEL) grown at low pH in the presence of NaNO(3) belong to space group P2(1) with unit-cell dimensions, a = 28.0, b = 62.5, c = 60.9 A and beta= 90.8 degrees with two molecules in the asymmetric unit. 1.8 A resolution intensity data, collected on a CAD-4 diffractometer, contained 17 524 reflections with F > 3sigma (93% complete). Our earlier preliminary 1.8 A model was refitted and refined using X-PLOR to an R value of 0.189. The deviations in the model from ideal geometry are 0.013 A in bond lengths and 2.8 degrees in bond angles. The r.m.s. deviation in the backbone atoms between the two molecules is 0.42 A. A comparison of HEL in different polymorphic crystal forms reveals that the prominent structural variability among them resides in two exposed regions 45-50 and 65-73 which are also regions of lattice contacts.

摘要

在低pH值且存在硝酸钠的条件下生长的蛋清溶菌酶(E.C. 3.2.1.17,HEL)单斜晶体属于空间群P2(1),其晶胞参数为a = 28.0 Å,b = 62.5 Å,c = 60.9 Å,β = 90.8°,不对称单元中有两个分子。在CAD - 4衍射仪上收集的1.8 Å分辨率的强度数据包含17524个F > 3σ的反射(完整性为93%)。我们早期的1.8 Å初步模型使用X - PLOR重新拟合和精修,R值为0.189。模型与理想几何结构的偏差为键长0.013 Å,键角2.8°。两个分子主链原子的均方根偏差为0.42 Å。对不同多晶型晶体形式的HEL进行比较发现,它们之间显著的结构变异性存在于两个暴露区域45 - 50和65 - 73,这也是晶格接触区域。

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