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贝加尔湖三种特有杜父鱼(杜父鱼亚目)线粒体DNA两个蛋白质编码区的比较研究

Comparative study of two protein-coding regions of mitochondrial DNA from three endemic sculpins (Cottoidei) of Lake Baikal.

作者信息

Grachev M A, Kholodilov N G, Fyodorov S P, Belikov S I, Sideleva V G, Zubin A A, Kharchenko V V

机构信息

Limnological Institute, Siberian Division of the Academy of Sciences of USSR, Irkutsk.

出版信息

J Mol Evol. 1992 Jan;34(1):85-90. doi: 10.1007/BF00163855.

Abstract

Two protein-coding regions (cytochrome b, ATPase 8, and part of ATPase 6) from mitochondrial DNA of Cottus kessleri, Cottocomephorus grewingki, and Cottocomephorus inermis--Baikalian endemic sculpins--were amplified via polymerase chain reaction, and sequenced. Two novel primers--L8352 (5'-TAAAGATTGGTGAC TCCCAACCACC) and H8773 (5'-GTAGGGAGT AAGCCCAATATGTT)--were used for the latter region. Phylogenies suggested by sequence divergence of the genes of ATPases appeared to be different from those computed from data for cytochrome b. The time of species branching was estimated as 1-2 million years (Myr) on the basis of merged sequences. Hence, members of the Baikalian cottoid species flock are much more distant from each other than members of the cichlid fish flocks of the great lakes of Africa (0.2 Myr). Topology of the phylogenetic tree does not contradict the relationships derived from morphological data. However, genetic distances suggest that C. grewingki and C. inermis are not sister species, contrary to general belief.

摘要

通过聚合酶链反应扩增并测序了贝加尔湖特有杜父鱼——凯氏杜父鱼、格氏双须杜父鱼和无鳞双须杜父鱼线粒体DNA的两个蛋白质编码区域(细胞色素b、ATP酶8以及ATP酶6的一部分)。对于后一个区域,使用了两条新引物——L8352(5'-TAAAGATTGGTGACTCCCAACCACC)和H8773(5'-GTAGGGAGTAAGCCCAATATGTT)。由ATP酶基因序列差异所表明的系统发育关系似乎与根据细胞色素b数据计算出的系统发育关系不同。根据合并序列估计物种分支时间为100万至200万年。因此,贝加尔湖杜父鱼物种群的成员彼此之间的亲缘关系比非洲大湖丽鱼科鱼群的成员(0.2百万年)更为疏远。系统发育树的拓扑结构与从形态学数据得出的关系并不矛盾。然而,遗传距离表明,与普遍看法相反,格氏双须杜父鱼和无鳞双须杜父鱼并非姐妹物种。

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