Dykhuizen Daniel E, Dean Antony M
Department of Ecology and Evolution, SUNY, Stony Brook, New York 11794, USA.
Genetics. 2004 Aug;167(4):2015-26. doi: 10.1534/genetics.103.025205.
The impact of adaptation on the persistence of a balanced polymorphism was explored using the lactose operon of Escherichia coli as a model system. Competition in chemostats for two substitutable resources, methylgalactoside and lactulose, generates stabilizing frequency-dependent selection when two different naturally isolated lac operons (TD2 and TD10) are used. The fate of this balanced polymorphism was tracked over evolutionary time by monitoring the frequency of fhuA-, a linked neutral genetic marker that confers resistance to the bacteriophage T5. In four out of nine chemostats the lac polymorphism persisted for 400-600 generations when the experiments were terminated. In the other five chemostats the fhuA polymorphism, and consequently the lac operon polymorphism, was lost between 86 and 219 generations. Four of 13 chemostat cultures monomorphic for the lac operon retained the neutral fhuA polymorphism for 450-550 generations until they were terminated; the remainder became monomorphic at fhuA between 63 and 303 generations. Specialists on each galactoside were isolated from chemostats that maintained the fhuA polymorphism, whether polymorphic or monomorphic at the lac operon. Strains isolated from three of four chemostats in which the lac polymorphism was preserved had switched their galactoside preference. Most of the chemostats where the fhuA polymorphism was lost also contained specialists. These results demonstrate that the initial polymorphism at lac was of little consequence to the outcome of long-term adaptive evolution. Instead, the fitnesses of evolved strains were dominated by mutations arising elsewhere in the genome, a fact confirmed by showing that operons isolated from their evolved backgrounds were alone unable to explain the presence of both specialists. Our results suggest that, once stabilized, ecological specialization prevented selective sweeps through the entire population, thereby promoting the maintenance of linked neutral polymorphisms.
以大肠杆菌的乳糖操纵子作为模型系统,探讨了适应性对平衡多态性持久性的影响。当使用两种不同的天然分离的乳糖操纵子(TD2和TD10)时,在恒化器中对两种可替代资源甲基半乳糖苷和乳果糖的竞争会产生稳定的频率依赖性选择。通过监测赋予对噬菌体T5抗性的连锁中性遗传标记fhuA-的频率,追踪这种平衡多态性在进化时间内的命运。在九个恒化器中的四个中,当实验终止时,乳糖多态性持续了400 - 600代。在其他五个恒化器中,fhuA多态性以及乳糖操纵子多态性在86至219代之间消失。13个乳糖操纵子单态的恒化器培养物中有4个在450 - 550代内保持中性fhuA多态性直至终止;其余的在63至303代之间变为fhuA单态。从维持fhuA多态性的恒化器中分离出每种半乳糖苷的专性菌株,无论乳糖操纵子是多态还是单态。在四个保存了乳糖多态性的恒化器中的三个中分离出的菌株改变了它们的半乳糖苷偏好。大多数fhuA多态性消失的恒化器中也含有专性菌株。这些结果表明,乳糖处最初的多态性对长期适应性进化的结果影响不大。相反,进化菌株的适应性主要由基因组其他位置出现的突变决定,这一事实通过表明从其进化背景中分离出的操纵子单独无法解释专性菌株的存在而得到证实。我们的结果表明,一旦稳定下来,生态特化会阻止选择性清除整个种群,从而促进连锁中性多态性的维持。