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了解人类DNA序列变异。

Understanding human DNA sequence variation.

作者信息

Kidd K K, Pakstis A J, Speed W C, Kidd J R

机构信息

Department of Genetics, Yale University School of Medicine, 333 Cedar St., New Haven, CT 06520-8005, USA.

出版信息

J Hered. 2004 Sep-Oct;95(5):406-20. doi: 10.1093/jhered/esh060.

Abstract

Over the past century researchers have identified normal genetic variation and studied that variation in diverse human populations to determine the amounts and distributions of that variation. That information is being used to develop an understanding of the demographic histories of the different populations and the species as a whole, among other studies. With the advent of DNA-based markers in the last quarter century, these studies have accelerated. One of the challenges for the next century is to understand that variation. One component of that understanding will be population genetics. We present here examples of many of the ways these new data can be analyzed from a population perspective using results from our laboratory on multiple individual DNA-based polymorphisms, many clustered in haplotypes, studied in multiple populations representing all major geographic regions of the world. These data support an "out of Africa" hypothesis for human dispersal around the world and begin to refine the understanding of population structures and genetic relationships. We are also developing baseline information against which we can compare findings at different loci to aid in the identification of loci subject, now and in the past, to selection (directional or balancing). We do not yet have a comprehensive understanding of the extensive variation in the human genome, but some of that understanding is coming from population genetics.

摘要

在过去的一个世纪里,研究人员已经识别出正常的基因变异,并在不同的人类群体中研究这种变异,以确定其数量和分布。除了其他研究之外,这些信息正被用于加深对不同群体以及整个物种的人口历史的理解。随着基于DNA的标记在过去二十五年中的出现,这些研究加速了。下个世纪的挑战之一是理解这种变异。这种理解的一个组成部分将是群体遗传学。我们在此展示了许多方法的示例,这些方法可以从群体角度分析这些新数据,这些方法使用了我们实验室对多个基于个体DNA的多态性的研究结果,其中许多多态性聚集在单倍型中,研究对象是代表世界所有主要地理区域的多个群体。这些数据支持了人类在全球扩散的“走出非洲”假说,并开始细化对群体结构和基因关系的理解。我们也在开发基线信息,以便我们能够比较不同基因座的研究结果,从而有助于识别现在和过去受到选择(定向或平衡)的基因座。我们尚未全面了解人类基因组中的广泛变异,但其中一些理解正来自群体遗传学。

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