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对先前涉及诵读困难的四个区域进行连锁分析:15号染色体q臂上一个基因座的确认

Linkage analyses of four regions previously implicated in dyslexia: confirmation of a locus on chromosome 15q.

作者信息

Chapman Nicola H, Igo Robert P, Thomson Jennifer B, Matsushita Mark, Brkanac Zoran, Holzman Ted, Berninger Virginia W, Wijsman Ellen M, Raskind Wendy H

机构信息

Department of Medicine, University of Washington, Seattle, Washington 98195, USA.

出版信息

Am J Med Genet B Neuropsychiatr Genet. 2004 Nov 15;131B(1):67-75. doi: 10.1002/ajmg.b.30018.

Abstract

Dyslexia is a common, complex disorder, which is thought to have a genetic component. There have been numerous reports of linkage to several regions of the genome for dyslexia and continuous dyslexia-related phenotypes. We attempted to confirm linkage of continuous measures of (1) accuracy and efficiency of phonological decoding; and (2) accuracy of single word reading (WID) to regions on chromosomes 2p, 6p, 15q, and 18p, using 111 families with a total of 898 members. We used both single-marker and multipoint variance components linkage analysis and Markov Chain Monte Carlo (MCMC) joint segregation and linkage analysis for initial inspection of these regions. Positive results were followed with traditional parametric lod score analysis using a model estimated by MCMC segregation analysis. No positive linkage signals were found on chromosomes 2p, 6p, or 18p. Evidence of linkage of WID to chromosome 15q was found with both methods of analysis. The maximum single-marker parametric lod score of 2.34 was obtained at a distance of 3 cM from D15S143. Multipoint analyses localized the putative susceptibility gene to the interval between markers GATA50C03 and D15S143, which falls between a region implicated in a recent genome screen for attention-deficit/hyperactivity disorder, and DYX1C1, a candidate gene for dyslexia. This apparent multiplicity of linkage signals in the region for developmental disorders may be the result of errors in map and/or model specification obscuring the pleiotropic effect of a single gene on different phenotypes, or it may reflect the presence of multiple genes.

摘要

诵读困难是一种常见的复杂疾病,被认为具有遗传成分。已有众多关于诵读困难及与诵读困难相关的持续性表型与基因组多个区域连锁的报道。我们试图用111个家族共898名成员,来确认(1)语音解码的准确性和效率;以及(2)单字阅读(WID)准确性这些连续性指标与2号染色体短臂、6号染色体短臂、15号染色体长臂和18号染色体短臂上区域的连锁关系。我们使用单标记和多点方差成分连锁分析以及马尔可夫链蒙特卡罗(MCMC)联合分离与连锁分析,对这些区域进行初步检测。得出阳性结果后,使用通过MCMC分离分析估计的模型进行传统参数化对数优势比分分析。在2号染色体短臂、6号染色体短臂或18号染色体短臂上未发现阳性连锁信号。两种分析方法均发现WID与15号染色体长臂存在连锁证据。在距D15S143 3厘摩处获得的最大单标记参数化对数优势比为2.34。多点分析将推定的易感基因定位在标记GATA50C03和D15S143之间的区间,该区间位于近期注意力缺陷/多动障碍基因组筛查涉及的区域与诵读困难候选基因DYX1C1之间。发育障碍区域中这种明显的连锁信号多样性,可能是由于图谱和/或模型设定错误掩盖了单个基因对不同表型的多效性作用,或者可能反映了多个基因的存在。

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