Suppr超能文献

通过磁弛豫色散测量血红蛋白中的高频动力学。

High frequency dynamics in hemoglobin measured by magnetic relaxation dispersion.

作者信息

Victor Ken, Van-Quynh Alexandra, Bryant Robert G

机构信息

Chemistry Department, University of Virginia, Charlottesville, Virginia, USA.

出版信息

Biophys J. 2005 Jan;88(1):443-54. doi: 10.1529/biophysj.104.046458. Epub 2004 Oct 8.

Abstract

The magnetic relaxation dispersion profiles for formate, acetate, and water protons are reported for aqueous solutions of hemoglobin singly and doubly labeled with a nitroxide and mercury(II) ion at cysteines at beta-93. Using two spin labels, one nuclear and one electron spin, a long intramolecular vector is defined between the two beta-93 positions in the protein. The paramagnetic contributions to the observed 1H spin-lattice relaxation rate constant are isolated from the magnetic relaxation dispersion profiles obtained on a dual-magnet apparatus that provides spectral density functions characterizing fluctuations sensed by intermoment dipolar interactions in the time range from the tens of microseconds to approximately 1 ps. Both formate and acetate ions are found to bind specifically within 5 angstroms of the beta-93 spin-label position and the relaxation dispersion has inflection points corresponding to correlation times of 30 ps and 4 ns for both ions. The 4-ns motion is identified with exchange of the anions from the site, whereas the 30-ps correlation time is identified with relative motions of the spin label and the bound anion in the protein environment close to beta-93. The magnetic field dependence of the paramagnetic contributions in both cases is well described by a simple Lorentzian spectral density function; no peaks in the spectral density function are observed. Therefore, the high frequency motions of the protein monitored by the intramolecular vector defined by the electron and nuclear spin are well characterized by a stationary random function of time. Attempts to examine long vector fluctuations by employing electron spin and nuclear spin double-labeling techniques did not yield unambiguous characterization of the high frequency motions of the vector between beta-93 positions on different chains.

摘要

报道了血红蛋白在β-93位半胱氨酸处单标记和双标记氮氧化物及汞(II)离子的水溶液中,甲酸根、乙酸根和水质子的磁弛豫色散曲线。使用两个自旋标记,一个核自旋标记和一个电子自旋标记,在蛋白质的两个β-93位之间定义了一个长的分子内矢量。从在双磁体装置上获得的磁弛豫色散曲线中分离出对观测到的1H自旋晶格弛豫速率常数的顺磁贡献,该装置提供了光谱密度函数,表征了在从几十微秒到约1皮秒的时间范围内通过瞬间偶极相互作用感知的涨落。发现甲酸根和乙酸根离子都特异性地结合在β-93自旋标记位置的5埃范围内,并且两种离子的弛豫色散都有对应于30皮秒和4纳秒相关时间的拐点。4纳秒的运动被确定为阴离子从该位点的交换,而30皮秒的相关时间被确定为自旋标记和蛋白质环境中靠近β-93的结合阴离子的相对运动。在这两种情况下,顺磁贡献的磁场依赖性都可以用一个简单的洛伦兹光谱密度函数很好地描述;在光谱密度函数中未观察到峰。因此,由电子和核自旋定义的分子内矢量监测的蛋白质高频运动可以通过一个平稳的时间随机函数很好地表征。尝试通过采用电子自旋和核自旋双标记技术来研究长矢量涨落,没有得到不同链上β-93位之间矢量高频运动的明确表征。

相似文献

3
Extreme-values statistics and dynamics of water at protein interfaces.极端值统计学与蛋白质界面上水的动力学。
J Phys Chem B. 2011 Nov 10;115(44):12845-58. doi: 10.1021/jp2053426. Epub 2011 Oct 18.

引用本文的文献

5
Hemoglobin senses body temperature.血红蛋白能感知体温。
Eur Biophys J. 2009 Jun;38(5):589-600. doi: 10.1007/s00249-009-0410-8. Epub 2009 Feb 24.
7
Noise and functional protein dynamics.噪声与功能性蛋白质动力学
Biophys J. 2005 Oct;89(4):2685-92. doi: 10.1529/biophysj.105.060178. Epub 2005 Jul 22.

本文引用的文献

2
Dynamics of protein and peptide hydration.蛋白质和肽的水合动力学。
J Am Chem Soc. 2004 Jan 14;126(1):102-14. doi: 10.1021/ja038325d.
8
Quaternary structure of hemoglobin in solution.溶液中血红蛋白的四级结构。
Proc Natl Acad Sci U S A. 2003 Jan 21;100(2):517-20. doi: 10.1073/pnas.232715799. Epub 2003 Jan 13.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验