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米米病毒的120万个碱基对的基因组序列。

The 1.2-megabase genome sequence of Mimivirus.

作者信息

Raoult Didier, Audic Stéphane, Robert Catherine, Abergel Chantal, Renesto Patricia, Ogata Hiroyuki, La Scola Bernard, Suzan Marie, Claverie Jean-Michel

机构信息

Unité des Rickettsies, Faculté de Médecine, CNRS UMR6020, Université de la Méditerranée, 13385 Marseille Cedex 05, France.

出版信息

Science. 2004 Nov 19;306(5700):1344-50. doi: 10.1126/science.1101485. Epub 2004 Oct 14.

Abstract

We recently reported the discovery and preliminary characterization of Mimivirus, the largest known virus, with a 400-nanometer particle size comparable to mycoplasma. Mimivirus is a double-stranded DNA virus growing in amoebae. We now present its 1,181,404-base pair genome sequence, consisting of 1262 putative open reading frames, 10% of which exhibit a similarity to proteins of known functions. In addition to exceptional genome size, Mimivirus exhibits many features that distinguish it from other nucleocytoplasmic large DNA viruses. The most unexpected is the presence of numerous genes encoding central protein-translation components, including four amino-acyl transfer RNA synthetases, peptide release factor 1, translation elongation factor EF-TU, and translation initiation factor 1. The genome also exhibits six tRNAs. Other notable features include the presence of both type I and type II topoisomerases, components of all DNA repair pathways, many polysaccharide synthesis enzymes, and one intein-containing gene. The size and complexity of the Mimivirus genome challenge the established frontier between viruses and parasitic cellular organisms. This new sequence data might help shed a new light on the origin of DNA viruses and their role in the early evolution of eukaryotes.

摘要

我们最近报道了对米米病毒(Mimivirus)的发现及初步特性研究,它是已知最大的病毒,其400纳米的颗粒大小与支原体相当。米米病毒是一种在变形虫中生长的双链DNA病毒。我们现在公布其1,181,404碱基对的基因组序列,该序列由1262个推定的开放阅读框组成,其中10%与已知功能的蛋白质具有相似性。除了基因组规模异常庞大外,米米病毒还具有许多使其有别于其他核质大DNA病毒的特征。最出人意料的是它拥有众多编码核心蛋白质翻译组件的基因,包括四种氨酰基转移RNA合成酶、肽释放因子1、翻译延伸因子EF-TU以及翻译起始因子1。该基因组还含有六种转运RNA。其他显著特征包括同时存在I型和II型拓扑异构酶、所有DNA修复途径的组件、许多多糖合成酶以及一个含内含肽的基因。米米病毒基因组的规模和复杂性对病毒与寄生性细胞生物之间既定的界限提出了挑战。这些新的序列数据可能有助于为DNA病毒的起源及其在真核生物早期进化中的作用带来新的启示。

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