Katouno Fuminori, Taguchi Masashi, Sakurai Kengo, Uchiyama Taku, Nikaidou Naoki, Nonaka Takamasa, Sugiyama Junji, Watanabe Takeshi
Department of Applied Biological Chemistry, Faculty of Agriculture, Niigata University, 8050 Ikarashi-2, Niigata 950-2181.
J Biochem. 2004 Aug;136(2):163-8. doi: 10.1093/jb/mvh105.
Chitinase B (ChiB) of S. marcescens has five exposed aromatic residues linearly aligned toward the catalytic cleft, Tyr481 and Trp479 in the C-terminal domain, and Trp252, Tyr240 and Phe190 in the catalytic domain. To determine the contribution of these residues to the hydrolysis of crystalline beta-chitin, site-directed mutagenesis, to replace them by alanine, was carried out. The Y481A, W479A, W252A, and Y240A mutations all decreased the binding activity and hydrolyzing activity toward beta-chitin microfibrils. Substitution of Trp residues affected the binding activity more severely than that of Tyr residues. The F190A mutation decreased neither the binding activity nor the hydrolyzing activity. None of the mutations decreased the hydrolyzing activity toward soluble substrates. These results suggest that ChiB hydrolyzes crystalline beta-chitin via a mechanism in which four exposed aromatic residues play important roles, similar to the mechanism of hydrolysis by ChiA of this bacterium, although the directions of hydrolysis of the two chitinases are opposite.
粘质沙雷氏菌的几丁质酶B(ChiB)有五个暴露的芳香族残基,它们线性排列并朝向催化裂隙,C端结构域中的Tyr481和Trp479,以及催化结构域中的Trp252、Tyr240和Phe190。为了确定这些残基对结晶β-几丁质水解的贡献,进行了定点诱变,用丙氨酸取代它们。Y481A、W479A、W252A和Y240A突变均降低了对β-几丁质微纤维的结合活性和水解活性。色氨酸残基的取代对结合活性的影响比酪氨酸残基更严重。F190A突变既没有降低结合活性也没有降低水解活性。这些突变均未降低对可溶性底物的水解活性。这些结果表明,ChiB通过一种机制水解结晶β-几丁质,其中四个暴露的芳香族残基发挥重要作用,这与该细菌的ChiA的水解机制类似,尽管这两种几丁质酶的水解方向相反。