Uchiyama T, Katouno F, Nikaidou N, Nonaka T, Sugiyama J, Watanabe T
Department of Applied Biological Chemistry, Faculty of Agriculture, Niigata University, 8050 Ikarashi-2, Niigata 950-2181, Japan.
J Biol Chem. 2001 Nov 2;276(44):41343-9. doi: 10.1074/jbc.M103610200. Epub 2001 Aug 24.
Four exposed aromatic residues, two in the N-terminal domain (Trp-69 and Trp-33) and two in the catalytic domain (Trp-245 and Phe-232) of Serratia marcescens chitinase A, are linearly aligned with the deep catalytic cleft. To investigate the importance of these residues in the binding activity and hydrolyzing activity against insoluble chitin, site-directed mutagenesis to alanine was carried out. The substitution of Trp-69, Trp-33, or Trp-245 significantly reduced the binding activity to both highly crystalline beta-chitin and colloidal chitin. The substitution of Phe-232, which is located closest to the catalytic cleft, did not affect the binding activity. On the other hand, the hydrolyzing activity against beta-chitin microfibrils was significantly reduced by the substitution of any one of the four aromatic residues including Phe-232. None of the mutations reduced the hydrolyzing activity against soluble substrates. These results clearly demonstrate that the four exposed aromatic residues are essential determinants for crystalline chitin hydrolysis. Three of them, two in the N-terminal domain and one in the catalytic domain, play vital roles in the chitin binding. Phe-232 appeared to be important for guiding the chitin chain into the catalytic cleft. Based on these observations, a model for processive hydrolysis of crystalline chitin by chitinase A is proposed.
粘质沙雷氏菌几丁质酶A的四个暴露芳香族残基,两个位于N端结构域(Trp-69和Trp-33),两个位于催化结构域(Trp-245和Phe-232),与深催化裂隙呈线性排列。为了研究这些残基在对不溶性几丁质的结合活性和水解活性中的重要性,进行了将其定点突变为丙氨酸的操作。Trp-69、Trp-33或Trp-245的取代显著降低了对高度结晶的β-几丁质和胶体几丁质的结合活性。最靠近催化裂隙的Phe-232的取代不影响结合活性。另一方面,包括Phe-232在内的四个芳香族残基中任何一个的取代都显著降低了对β-几丁质微纤维的水解活性。没有一个突变降低对可溶性底物的水解活性。这些结果清楚地表明,这四个暴露的芳香族残基是结晶几丁质水解的关键决定因素。其中三个,两个在N端结构域,一个在催化结构域,在几丁质结合中起重要作用。Phe-232似乎对将几丁质链引导到催化裂隙中很重要。基于这些观察结果,提出了几丁质酶A对结晶几丁质进行连续水解的模型。