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线虫分子诊断:从条带到条形码

Nematode molecular diagnostics: from bands to barcodes.

作者信息

Powers Tom

机构信息

Department of Plant Pathology, University of Nebraska Lincoln, Lincoln, Nebraska 68583-0722, USA.

出版信息

Annu Rev Phytopathol. 2004;42:367-83. doi: 10.1146/annurev.phyto.42.040803.140348.

Abstract

Nematodes are considered among the most difficult animals to identify. DNA-based diagnostic methods have already gained acceptance in applications ranging from quarantine determinations to assessments of biodiversity. Researchers are currently in an information-gathering mode, with intensive efforts applied to accumulating nucleotide sequence of 18S and 28S ribosomal genes, internally transcribed spacer regions, and mitochondrial genes. Important linkages with collateral data such as digitized images, video clips and specimen voucher web pages are being established on GenBank and NemATOL, the nematode-specific Tree of Life database. The growing DNA taxonomy of nematodes has lead to their use in testing specific short sequences of DNA as a "barcode" for the identification of all nematode species.

摘要

线虫被认为是最难鉴定的动物之一。基于DNA的诊断方法已在从检疫判定到生物多样性评估等各种应用中得到认可。研究人员目前正处于信息收集阶段,正在集中精力积累18S和28S核糖体基因、内部转录间隔区以及线粒体基因的核苷酸序列。在GenBank和线虫特定的生命之树数据库NemATOL上,正在建立与数字化图像、视频片段和标本凭证网页等辅助数据的重要联系。线虫不断发展的DNA分类学已导致其被用于测试特定的DNA短序列,作为鉴定所有线虫物种的“条形码”。

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