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大肠杆菌中rRNA基因拷贝数对生活史的影响

Life history implications of rRNA gene copy number in Escherichia coli.

作者信息

Stevenson Bradley S, Schmidt Thomas M

机构信息

Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan 48823-4320, USA.

出版信息

Appl Environ Microbiol. 2004 Nov;70(11):6670-7. doi: 10.1128/AEM.70.11.6670-6677.2004.

Abstract

The role of the rRNA gene copy number as a central component of bacterial life histories was studied by using strains of Escherichia coli in which one or two of the seven rRNA operons (rrnA and/or rrnB) were deleted. The relative fitness of these strains was determined in competition experiments in both batch and chemostat cultures. In batch cultures, the decrease in relative fitness corresponded to the number of rRNA operons deleted, which could be accounted for completely by increased lag times and decreased growth rates. The magnitude of the deleterious effect varied with the environment in which fitness was measured: the negative consequences of rRNA operon deletions increased under culture conditions permitting more-rapid growth. The rRNA operon deletion strains were not more effective competitors under the regimen of constant, limited resources provided in chemostat cultures. Enhanced fitness in chemostat cultures would have suggested a simple tradeoff in which deletion strains grew faster (due to more efficient resource utilization) under resource limitation. The contributions of growth rate, lag time, Ks, and death rate to the fitness of each strain were verified through mathematical simulation of competition experiments. These data support the hypothesis that multiple rRNA operons are a component of bacterial life history and that they confer a selective advantage permitting microbes to respond quickly and grow rapidly in environments characterized by fluctuations in resource availability.

摘要

通过使用缺失七个rRNA操纵子(rrnA和/或rrnB)中的一个或两个的大肠杆菌菌株,研究了rRNA基因拷贝数作为细菌生活史核心组成部分的作用。在分批培养和恒化器培养的竞争实验中测定了这些菌株的相对适应性。在分批培养中,相对适应性的降低与缺失的rRNA操纵子数量相对应,这完全可以通过延长的延迟期和降低的生长速率来解释。有害效应的程度随测量适应性的环境而变化:在允许更快生长的培养条件下,rRNA操纵子缺失的负面后果会增加。在恒化器培养提供的恒定有限资源条件下,rRNA操纵子缺失菌株并不是更有效的竞争者。在恒化器培养中适应性增强将表明存在一种简单的权衡,即缺失菌株在资源限制下生长得更快(由于资源利用更有效)。通过竞争实验的数学模拟验证了生长速率、延迟期、Ks和死亡率对每个菌株适应性的贡献。这些数据支持以下假设:多个rRNA操纵子是细菌生活史的一个组成部分,并且它们赋予了一种选择优势,使微生物能够在资源可用性波动的环境中快速响应并快速生长。

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