Smet Caroline, Leroy Arnaud, Sillen Alain, Wieruszeski Jean-Michel, Landrieu Isabelle, Lippens Guy
CNRS--Université de Lille 2, UMR 8525, Institut Pasteur de Lille, B. P. 245, 59019 Lille, France.
Chembiochem. 2004 Dec 3;5(12):1639-46. doi: 10.1002/cbic.200400145.
A combined strategy to obtain a partial NMR assignment of the neuronal Tau protein is presented. Confronted with the extreme spectral degeneracy that the spectrum of this 441 amino acid long unstructured protein presents, we have introduced a graphical procedure based on residue type-specific product planes. Combining this strategy with the search for pairwise motifs, and combining the spectra of different Tau isoforms and even of peptides derived from the native sequence, we arrive at a partial assignment that is sufficient to map the interactions of Tau with its molecular partners. The obtained assignments equally confirm the absence of regular secondary structure in the isolated protein.
本文提出了一种用于获得神经元 Tau 蛋白部分核磁共振(NMR)归属的组合策略。面对这种由 441 个氨基酸组成的无结构蛋白的光谱所呈现的极端光谱简并性,我们引入了一种基于残基类型特异性产物平面的图形化方法。将该策略与成对基序搜索相结合,并结合不同 Tau 异构体甚至源自天然序列的肽段的光谱,我们得到了一个足以绘制 Tau 与其分子伴侣相互作用图谱的部分归属。所获得的归属同样证实了分离蛋白中不存在规则的二级结构。