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通过圆二色性分析无半胱氨酸的酵母线粒体柠檬酸转运蛋白及四种单半胱氨酸变体的二级结构。

Analysis of the secondary structure of the cys-less yeast mitochondrial citrate transport protein and four single-cys variants by circular dichroism.

作者信息

Cascio Michael, Mayor June A, Kaplan Ronald S

机构信息

Department of Molecular Genetics and Biochemistry, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.

出版信息

J Bioenerg Biomembr. 2004 Oct;36(5):429-38. doi: 10.1023/B:JOBB.0000047325.48943.71.

DOI:10.1023/B:JOBB.0000047325.48943.71
PMID:15534390
Abstract

Utilizing cysteine scanning mutagenesis, with functional Cys-less citrate transport protein (CTP) serving as the starting template, we previously demonstrated that four single-Cys mutants located in transmembrane domains III and IV, rendered the CTP nonfunctional. The present investigations assess and quantify the secondary structure of the Cys-less CTP and the four single-Cys mutants, both in the absence and presence of citrate, via circular dichroism (CD) spectroscopy. In detergent micelles, highly purified Cys-less CTP contained approximately 50% alpha-helix and approximately 20% beta-sheet. The CD spectra of the G119C, E122C, R181C, and R189C mutants in detergent micelles were virtually superimposable with that of the functional Cys-less CTP, thereby suggesting that the wild-type residues, rather than affecting structure, may assume important mechanistic roles. Exogenously added citrate caused a significant change in the CD spectra of all solubilized CTP samples. Analyses of the spectra of the Cys-less CTP indicated an approximately 10% increase in its alpha-helical content in the presence of citrate. The conformational changes effected by the addition of substrate were less pronounced with the single-Cys mutants. Studies of the Cys-less CTP reconstituted in liposomes indicated that while the CD spectra was red-shifted, the net secondary structure of the reconstituted carrier is approximately equivalent to that of the transporter in detergent micelles, and displayed a response to added citrate. In combination, the above studies indicate that purified Cys-less CTP in either sarkosyl micelles or in liposomes, and the four inactive single-Cys mutants in sarkosyl micelles, retain native-like structure, and thus represent ideal material for detailed structural characterization.

摘要

利用半胱氨酸扫描诱变技术,以无半胱氨酸的功能性柠檬酸转运蛋白(CTP)作为起始模板,我们之前证明位于跨膜结构域III和IV的四个单半胱氨酸突变体使CTP失去功能。本研究通过圆二色性(CD)光谱,评估并量化了无半胱氨酸的CTP和四个单半胱氨酸突变体在有无柠檬酸存在时的二级结构。在去污剂胶束中,高度纯化的无半胱氨酸CTP含有约50%的α-螺旋和约20%的β-折叠。去污剂胶束中G119C、E122C、R181C和R189C突变体的CD光谱与功能性无半胱氨酸CTP的光谱几乎完全重叠,从而表明野生型残基可能承担重要的机制作用,而非影响结构。外源添加柠檬酸导致所有溶解的CTP样品的CD光谱发生显著变化。对无半胱氨酸CTP光谱的分析表明,在有柠檬酸存在时其α-螺旋含量增加了约10%。单半胱氨酸突变体因添加底物而引起的构象变化不太明显。对脂质体中重构的无半胱氨酸CTP的研究表明,虽然CD光谱发生了红移,但重构载体的净二级结构与去污剂胶束中的转运体大致相当,并对添加的柠檬酸有响应。综合来看,上述研究表明,在十二烷基肌氨酸钠胶束或脂质体中的纯化无半胱氨酸CTP,以及十二烷基肌氨酸钠胶束中的四个无活性单半胱氨酸突变体,保留了类似天然的结构,因此是进行详细结构表征的理想材料。

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本文引用的文献

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Homology-modeled structure of the yeast mitochondrial citrate transport protein.酵母线粒体柠檬酸转运蛋白的同源建模结构。
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The mitochondrial citrate transport protein: probing the secondary structure of transmembrane domain III, identification of residues that likely comprise a portion of the citrate transport pathway, and development of a model for the putative TMDIII-TMDIII' interface.线粒体柠檬酸转运蛋白:探究跨膜结构域III的二级结构,鉴定可能构成柠檬酸转运途径一部分的残基,并构建假定的跨膜结构域III-跨膜结构域III'界面模型。
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DICHROWEB: an interactive website for the analysis of protein secondary structure from circular dichroism spectra.DICHROWEB:一个用于从圆二色光谱分析蛋白质二级结构的交互式网站。
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