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嗜热天然纤维二糖水解酶CBH IB的三维结构以及来自丝状真菌艾默生篮状菌的cel7基因的分子特征

Three-dimensional structure of a thermostable native cellobiohydrolase, CBH IB, and molecular characterization of the cel7 gene from the filamentous fungus, Talaromyces emersonii.

作者信息

Grassick Alice, Murray Patrick G, Thompson Roisin, Collins Catherine M, Byrnes Lucy, Birrane Gabriel, Higgins Timothy M, Tuohy Maria G

机构信息

Molecular Glycobiotechnology Group, Department of Biochemistry, National University of Ireland, Galway, Ireland.

出版信息

Eur J Biochem. 2004 Nov;271(22):4495-506. doi: 10.1111/j.1432-1033.2004.04409.x.

DOI:10.1111/j.1432-1033.2004.04409.x
PMID:15560790
Abstract

The X-ray structure of native cellobiohydrolase IB (CBH IB) from the filamentous fungus Talaromyces emersonii, PDB 1Q9H, was solved to 2.4 A by molecular replacement. 1Q9H is a glycoprotein that consists of a large, single domain with dimensions of approximately 60 A x 40 A x 50 A and an overall beta-sandwich structure, the characteristic fold of Family 7 glycosyl hydrolases (GH7). It is the first structure of a native glycoprotein and cellulase from this thermophilic eukaryote. The long cellulose-binding tunnel seen in GH7 Cel7A from Trichoderma reesei is conserved in 1Q9H, as are the catalytic residues. As a result of deletions and other changes in loop regions, the binding and catalytic properties of T. emersonii 1Q9H are different. The gene (cel7) encoding CBH IB was isolated from T. emersonii and expressed heterologously with an N-terminal polyHis-tag, in Escherichia coli. The deduced amino acid sequence of cel7 is homologous to fungal cellobiohydrolases in GH7. The recombinant cellobiohydrolase was virtually inactive against methylumberiferyl-cellobioside and chloronitrophenyl-lactoside, but partial activity could be restored after refolding of the urea-denatured enzyme. Profiles of cel7 expression in T. emersonii, investigated by Northern blot analysis, revealed that expression is regulated at the transcriptional level. Putative regulatory element consensus sequences for cellulase transcription factors have been identified in the upstream region of the cel7 genomic sequence.

摘要

通过分子置换法,解析了丝状真菌埃默森篮状菌天然纤维二糖水解酶IB(CBH IB)(PDB 1Q9H)的X射线结构,分辨率达2.4 Å。1Q9H是一种糖蛋白,由一个大的单结构域组成,尺寸约为60 Å×40 Å×50 Å,整体为β-折叠结构,这是7家族糖基水解酶(GH7)的特征性折叠。它是来自这种嗜热真核生物的天然糖蛋白和纤维素酶的首个结构。里氏木霉的GH7 Cel7A中可见的长纤维素结合通道在1Q9H中保守,催化残基也同样保守。由于环区的缺失和其他变化,埃默森篮状菌1Q9H的结合和催化特性有所不同。从埃默森篮状菌中分离出编码CBH IB的基因(cel7),并在大肠杆菌中与N端多组氨酸标签一起异源表达。cel7推导的氨基酸序列与GH7中的真菌纤维二糖水解酶同源。重组纤维二糖水解酶对甲基伞形酮基纤维二糖苷和氯硝基苯基乳糖苷几乎无活性,但尿素变性酶复性后可恢复部分活性。通过Northern印迹分析研究了cel7在埃默森篮状菌中的表达谱,结果显示表达在转录水平受到调控。在cel7基因组序列的上游区域已鉴定出纤维素酶转录因子的推定调控元件共有序列。

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