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超广谱β-内酰胺酶Toho-1中69位和238位残基之间的一个工程化二硫键降低了其对第三代头孢菌素的活性。

An engineered disulfide bond between residues 69 and 238 in extended-spectrum beta-lactamase Toho-1 reduces its activity toward third-generation cephalosporins.

作者信息

Shimizu-Ibuka Akiko, Matsuzawa Hiroshi, Sakai Hiroshi

机构信息

Department of Food and Nutritional Sciences, University of Shizuoka, 52-1 Yada, Shizuoka 422-8526, Japan.

出版信息

Biochemistry. 2004 Dec 21;43(50):15737-45. doi: 10.1021/bi048488u.

Abstract

Previous crystallographic structural analysis of extended-spectrum beta-lactamase Toho-1 predicted that the high flexibility of beta-strand B3, the region that contains a conserved KTG motif and forms one wall of the substrate-binding site, could be one of the key features contributing to Toho-1 activity toward third-generation cephalosporins. To investigate whether this possible flexibility really affects the substrate profile of this enzyme, two Toho-1 mutants have been produced, G238C and G238C/G239in, in which the glycine residue at position 238 was replaced with a cysteine and an additional glycine residue was inserted. Our intent was to introduce a disulfide bond between the cysteine residues at positions 69 and 238, and thus to lock the position of beta-strand B3. The results of 5,5'-dithiobis(2-nitrobenzoic acid) (DTNB) titration indicated formation of a new disulfide bridge in the G238C mutant, although disulfide bond formation was not confirmed in the G238C/G239in mutant. Kinetic analysis showed that the activity of the G238C mutant decreased drastically against third-generation cephalosporins, while its catalytic efficiency against penicillins and first-generation cephalosporins was almost identical to that of the wild-type enzyme. This result was consistent with the prediction that flexibility in beta-strand B3 was critical for activity against third-generation cephalosporins in Toho-1. Furthermore, we have determined the crystal structure of the G238C mutant enzyme to analyze the structural changes in detail. The structural model clearly shows the introduction of a new disulfide bridge and that there is no appreciable difference between the overall structures of the wild-type enzyme and the G238C mutant, although the introduced disulfide bond slightly influenced the positions of Ser237 on beta-strand B3 and Asn170 on the Omega loop. The results of our kinetic and structural analyses suggest that the flexibility of beta-strand B3, as well as the positions of Ser237 and the Omega loop, is critical for the substrate specificity expansion of Toho-1.

摘要

此前对超广谱β-内酰胺酶Toho-1的晶体结构分析预测,β链B3具有较高的灵活性,该区域包含一个保守的KTG基序并构成底物结合位点的一侧壁,这可能是Toho-1对第三代头孢菌素具有活性的关键特征之一。为了研究这种可能的灵活性是否真的影响该酶的底物谱,已构建了两个Toho-1突变体,G238C和G238C/G239in,其中第238位的甘氨酸残基被半胱氨酸取代,并额外插入了一个甘氨酸残基。我们的目的是在第69位和第238位的半胱氨酸残基之间引入一个二硫键,从而锁定β链B3的位置。5,5'-二硫代双(2-硝基苯甲酸)(DTNB)滴定结果表明,G238C突变体中形成了一个新的二硫键,尽管在G238C/G239in突变体中未证实二硫键的形成。动力学分析表明,G238C突变体对第三代头孢菌素的活性急剧下降,而其对青霉素和第一代头孢菌素的催化效率与野生型酶几乎相同。这一结果与β链B3的灵活性对Toho-1中第三代头孢菌素活性至关重要的预测一致。此外,我们已经确定了G238C突变体酶的晶体结构,以详细分析结构变化。结构模型清楚地显示了新二硫键的引入,并且野生型酶和G·238C突变体的整体结构之间没有明显差异,尽管引入的二硫键略微影响了β链B3上的Ser23·7和Ω环上的Asn170的位置。我们的动力学和结构分析结果表明,β链B3的灵活性以及Ser237和Ω环的位置对Toho-1的底物特异性扩展至关重要。

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