• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种RNA解旋酶对粗糙脉孢菌生物钟的调控

Regulation of the Neurospora circadian clock by an RNA helicase.

作者信息

Cheng Ping, He Qun, He Qiyang, Wang Lixin, Liu Yi

机构信息

Department of Physiology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.

出版信息

Genes Dev. 2005 Jan 15;19(2):234-41. doi: 10.1101/gad.1266805. Epub 2004 Dec 29.

DOI:10.1101/gad.1266805
PMID:15625191
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC545885/
Abstract

The eukaryotic circadian oscillators consist of autoregulatory negative-feedback loops. FRQ, WC-1, and WC-2 are three known components of the negative-feedback loop of the Neurospora circadian oscillator. FRQ represses its own transcription by interacting with the WC-1/WC-2 complex and inhibiting WC's role in transcriptional activation. Here we show that all FRQ associates with FRH, an essential DEAD box-containing RNA helicase in Neurospora. The budding yeast homolog of FRH, Dob1p/Mtr4p, is a cofactor of exosome, an important regulator of RNA metabolism in eukaryotes. Down-regulation of FRH by inducible expression of a hairpin RNA leads to low levels of FRQ but high levels of frq RNA and the abolishment of circadian rhythmicities. FRH is associated with the WC complex and this interaction is maintained in a frq null strain. Disruption of the FRQ-FRH complex by deleting a domain in FRQ eliminates the FRQ-WC interaction, suggesting that FRH mediates the interaction between FRQ and the WC complex. These data demonstrate that FRH is an essential component in the circadian negative-feedback loop and reveal an unexpected role of an RNA helicase in regulating gene transcription.

摘要

真核生物钟振荡器由自动调节的负反馈环组成。FRQ、WC-1和WC-2是粗糙脉孢菌生物钟振荡器负反馈环的三个已知组成部分。FRQ通过与WC-1/WC-2复合物相互作用并抑制WC在转录激活中的作用来抑制其自身的转录。在此我们表明,所有的FRQ都与FRH相关联,FRH是粗糙脉孢菌中一种必需的含DEAD盒的RNA解旋酶。FRH在芽殖酵母中的同源物Dob1p/Mtr4p是外泌体的一个辅助因子,外泌体是真核生物中RNA代谢的重要调节因子。通过诱导表达发夹RNA来下调FRH会导致FRQ水平降低,但frq RNA水平升高以及昼夜节律性消失。FRH与WC复合物相关联,并且这种相互作用在frq缺失菌株中得以维持。通过删除FRQ中的一个结构域来破坏FRQ-FRH复合物会消除FRQ-WC相互作用,这表明FRH介导了FRQ与WC复合物之间的相互作用。这些数据表明FRH是生物钟负反馈环中的一个必需组成部分,并揭示了一种RNA解旋酶在调节基因转录中的意想不到的作用。

相似文献

1
Regulation of the Neurospora circadian clock by an RNA helicase.一种RNA解旋酶对粗糙脉孢菌生物钟的调控
Genes Dev. 2005 Jan 15;19(2):234-41. doi: 10.1101/gad.1266805. Epub 2004 Dec 29.
2
FRQ-interacting RNA helicase mediates negative and positive feedback in the Neurospora circadian clock.FRQ 相互作用的 RNA 解旋酶在 Neurospora 生物钟中介导负反馈和正反馈。
Genetics. 2010 Feb;184(2):351-61. doi: 10.1534/genetics.109.111393. Epub 2009 Nov 30.
3
Interlocked feedback loops contribute to the robustness of the Neurospora circadian clock.相互关联的反馈回路有助于粗糙脉孢菌生物钟的稳健性。
Proc Natl Acad Sci U S A. 2001 Jun 19;98(13):7408-13. doi: 10.1073/pnas.121170298.
4
VIVID interacts with the WHITE COLLAR complex and FREQUENCY-interacting RNA helicase to alter light and clock responses in Neurospora.VIVID 与 WHITE COLLAR 复合物和 FREQUENCY-interacting RNA 解旋酶相互作用,改变Neurospora 中的光和生物钟反应。
Proc Natl Acad Sci U S A. 2010 Sep 21;107(38):16709-14. doi: 10.1073/pnas.1009474107. Epub 2010 Aug 31.
5
The RNA helicase FRH is an ATP-dependent regulator of CK1a in the circadian clock of Neurospora crassa.RNA 解旋酶 FRH 是粗糙脉孢菌生物钟中 CK1a 的 ATP 依赖性调节因子。
Nat Commun. 2014 Apr 7;5:3598. doi: 10.1038/ncomms4598.
6
PRD-1, a Component of the Circadian System of Neurospora crassa, Is a Member of the DEAD-box RNA Helicase Family.PRD-1是粗糙脉孢菌昼夜节律系统的一个组成部分,属于DEAD-box RNA解旋酶家族成员。
J Biol Rhythms. 2016 Jun;31(3):258-71. doi: 10.1177/0748730416639717. Epub 2016 Mar 29.
7
Closing the circadian negative feedback loop: FRQ-dependent clearance of WC-1 from the nucleus.关闭昼夜节律负反馈回路:FRQ 依赖的 WC-1 从细胞核的清除。
Genes Dev. 2008 Nov 15;22(22):3196-204. doi: 10.1101/gad.1706908. Epub 2008 Nov 7.
8
Circadian clock-specific roles for the light response protein WHITE COLLAR-2.光反应蛋白白领-2的昼夜节律时钟特异性作用。
Mol Cell Biol. 2001 Apr;21(8):2619-28. doi: 10.1128/MCB.21.8.2619-2628.2001.
9
Role for Protein Kinase A in the Neurospora Circadian Clock by Regulating White Collar-Independent frequency Transcription through Phosphorylation of RCM-1.蛋白激酶A通过磷酸化RCM-1调控不依赖白领因子的频率转录在粗糙脉孢菌生物钟中的作用
Mol Cell Biol. 2015 Jun;35(12):2088-102. doi: 10.1128/MCB.00709-14. Epub 2015 Apr 6.
10
Conserved RNA helicase FRH acts nonenzymatically to support the intrinsically disordered neurospora clock protein FRQ.保守的 RNA 解旋酶 FRH 发挥非酶活性以支持天然无规的 Neurospora 生物钟蛋白 FRQ。
Mol Cell. 2013 Dec 26;52(6):832-43. doi: 10.1016/j.molcel.2013.11.005. Epub 2013 Dec 5.

引用本文的文献

1
Individual peroxiredoxin or Tor pathway components are not required for circadian clock function in Neurospora crassa.在粗糙脉孢菌中,昼夜节律钟功能并不需要单个过氧化物氧化还原酶或雷帕霉素靶蛋白(Tor)信号通路组件。
Fungal Biol. 2025 Oct;129(6):101619. doi: 10.1016/j.funbio.2025.101619. Epub 2025 Jun 27.
2
Circadian clock is critical for fungal pathogenesis by regulating zinc starvation response and secondary metabolism.生物钟通过调节锌饥饿反应和次级代谢对真菌致病性至关重要。
Sci Adv. 2025 Mar 28;11(13):eads1341. doi: 10.1126/sciadv.ads1341.
3
SWI/SNF-type complexes-transcription factor interplay: a key regulatory interaction.SWI/SNF 型复合物与转录因子的相互作用:一种关键的调控相互作用。
Cell Mol Biol Lett. 2025 Mar 10;30(1):30. doi: 10.1186/s11658-025-00704-y.
4
Checkpoint kinases regulate the circadian clock after DNA damage by influencing chromatin dynamics.检查点激酶通过影响染色质动力学在DNA损伤后调节生物钟。
Nucleic Acids Res. 2025 Feb 27;53(5). doi: 10.1093/nar/gkaf162.
5
Disordered clock protein interactions and charge blocks turn an hourglass into a persistent circadian oscillator.紊乱的生物钟蛋白相互作用和电荷阻断将沙漏转变为持续的昼夜节律振荡器。
Nat Commun. 2024 Apr 25;15(1):3523. doi: 10.1038/s41467-024-47761-z.
6
Transcriptional rewiring of an evolutionarily conserved circadian clock.转录重编一个进化上保守的生物钟。
EMBO J. 2024 May;43(10):2015-2034. doi: 10.1038/s44318-024-00088-3. Epub 2024 Apr 16.
7
Phosphorylation, disorder, and phase separation govern the behavior of Frequency in the fungal circadian clock.磷酸化、无序和相分离控制真菌生物钟中频率的行为。
Elife. 2024 Mar 25;12:RP90259. doi: 10.7554/eLife.90259.
8
The Function, Regulation, and Mechanism of Protein Turnover in Circadian Systems in and Other Species.植物及其他物种昼夜节律系统中蛋白质周转的功能、调控及机制
Int J Mol Sci. 2024 Feb 22;25(5):2574. doi: 10.3390/ijms25052574.
9
The Stress of Fungicides Changes the Expression of Clock Protein CmFRQ and the Morphology of Fruiting Bodies of .杀菌剂胁迫改变生物钟蛋白CmFRQ的表达及[某种生物]子实体的形态。 (原文中“of.”后面内容缺失)
J Fungi (Basel). 2024 Feb 13;10(2):150. doi: 10.3390/jof10020150.
10
Circadian regulation of physiology by disordered protein-protein interactions.通过紊乱的蛋白质-蛋白质相互作用对生理进行昼夜节律调节。
Curr Opin Struct Biol. 2024 Feb;84:102743. doi: 10.1016/j.sbi.2023.102743. Epub 2023 Dec 13.

本文引用的文献

1
Efficient gene silencing by expression of double stranded RNA in Neurospora crassa.通过在粗糙脉孢菌中表达双链RNA实现高效基因沉默。
Fungal Genet Biol. 2004 Nov;41(11):1016-24. doi: 10.1016/j.fgb.2004.08.002.
2
DEAD-box proteins: the driving forces behind RNA metabolism.DEAD盒蛋白:RNA代谢背后的驱动力
Nat Rev Mol Cell Biol. 2004 Mar;5(3):232-41. doi: 10.1038/nrm1335.
3
Cytoplasmic degradation of splice-defective pre-mRNAs and intermediates.剪接缺陷型前体mRNA和中间体的细胞质降解
Mol Cell. 2003 Dec;12(6):1453-65. doi: 10.1016/s1097-2765(03)00488-x.
4
FWD1-mediated degradation of FREQUENCY in Neurospora establishes a conserved mechanism for circadian clock regulation.在脉孢菌中,FWD1介导的生物钟频率蛋白降解建立了一种保守的昼夜节律时钟调节机制。
EMBO J. 2003 Sep 1;22(17):4421-30. doi: 10.1093/emboj/cdg425.
5
Rhythmic binding of a WHITE COLLAR-containing complex to the frequency promoter is inhibited by FREQUENCY.含白领复合体与频率启动子的节律性结合受到频率的抑制。
Proc Natl Acad Sci U S A. 2003 May 13;100(10):5914-9. doi: 10.1073/pnas.1030057100. Epub 2003 Apr 24.
6
WHITE COLLAR-1, a multifunctional neurospora protein involved in the circadian feedback loops, light sensing, and transcription repression of wc-2.白领-1,一种参与昼夜节律反馈回路、光感知以及wc-2转录抑制的多功能粗糙脉孢菌蛋白。
J Biol Chem. 2003 Feb 7;278(6):3801-8. doi: 10.1074/jbc.M209592200. Epub 2002 Nov 25.
7
White collar-1, a DNA binding transcription factor and a light sensor.白领蛋白-1,一种DNA结合转录因子及光感受器。
Science. 2002 Aug 2;297(5582):840-3. doi: 10.1126/science.1072795. Epub 2002 Jul 4.
8
Processing of 3'-extended read-through transcripts by the exosome can generate functional mRNAs.外切体对3' 延伸的通读转录本进行加工可产生功能性mRNA。
Mol Cell. 2002 Jun;9(6):1285-96. doi: 10.1016/s1097-2765(02)00544-0.
9
Regulation of the Neurospora circadian clock by casein kinase II.酪蛋白激酶II对粗糙脉孢菌生物钟的调控
Genes Dev. 2002 Apr 15;16(8):994-1006. doi: 10.1101/gad.965102.
10
Novel genomic cDNA hybrids produce effective RNA interference in adult Drosophila.新型基因组cDNA杂交体在成年果蝇中产生有效的RNA干扰。
Neuron. 2002 Jan 17;33(2):177-84. doi: 10.1016/s0896-6273(02)00560-3.