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糖基转移酶中底物诱导的构象变化。

Substrate-induced conformational changes in glycosyltransferases.

作者信息

Qasba Pradman K, Ramakrishnan Boopathy, Boeggeman Elizabeth

机构信息

Structural Glycobiology Section, Laboratory of Experimental and Computational Biology, CCR, NCI-Frederick, MD 21702, USA.

出版信息

Trends Biochem Sci. 2005 Jan;30(1):53-62. doi: 10.1016/j.tibs.2004.11.005.

Abstract

Oligosaccharide chains of glycoproteins, glycolipids and glycosaminoglycans are synthesized by glycosyltransferases by the transfer of specific glycosyl moieties from activated sugar-nucleotide donors to specific acceptors. Structural studies on several of these enzymes have shown that one or two flexible loops at the substrate-binding site of the enzymes undergo a marked conformational change from an open to a closed conformation on binding the donor substrate. This conformational change, in which the loop acts as a lid covering the bound donor substrate, creates an acceptor-binding site. After the glycosyl unit is transferred from the donor to the acceptor, the saccharide product is ejected and the loop reverts to its native conformation, thereby releasing the remaining nucleotide moiety. The specificity of the sugar donor is determined by a few residues in the sugar-nucleotide-binding pocket of the enzyme that are conserved among the family members from different species.

摘要

糖蛋白、糖脂和糖胺聚糖的寡糖链是由糖基转移酶通过将特定糖基部分从活化的糖核苷酸供体转移到特定受体而合成的。对其中几种酶的结构研究表明,酶的底物结合位点处的一个或两个柔性环在结合供体底物时会发生从开放构象到闭合构象的显著构象变化。这种构象变化中,环充当覆盖结合的供体底物的盖子,形成一个受体结合位点。糖基单元从供体转移到受体后,糖类产物被排出,环恢复到其天然构象,从而释放剩余的核苷酸部分。糖供体的特异性由酶的糖核苷酸结合口袋中的几个残基决定,这些残基在来自不同物种的家族成员中是保守的。

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