Leeper Thomas C, Varani Gabriele
Department of Biochemistry and Department of Chemistry, University of Washington, Seattle, WA 98195-1700, USA.
RNA. 2005 Apr;11(4):394-403. doi: 10.1261/rna.7222505. Epub 2005 Feb 9.
The ribonucleoprotein enzyme telomerase ensures the stability and fidelity of linear chromosome ends by elongating the telomeric DNA that is lost during each round of DNA replication. All telomerases contain a catalytic protein component homologous to viral reverse transcriptases (TERT) and an RNA (TR) that provides the template sequence, acts as the scaffold for ribonucleoprotein assembly, and activates the enzyme for catalysis. Vertebrate telomerase RNAs contain three highly conserved structural and functional domains: the template domain, the "CR4-CR5" or "activation" domain essential for activation of the enzymatic activity, and a 3'-terminal "box H/ACA"-homology domain responsible for ribonucleprotein assembly and maturation. Here we report the NMR structure of a functionally essential RNA structural element derived from the human telomerase RNA CR4-CR5 domain. This RNA, referred to as hTR J6, forms a stable hairpin interrupted by a single nucleotide bulge and an asymmetric internal loop. Previous work on telomerase has shown that deletion of the hTR J6 asymmetric internal loop results in an RNA incapable of binding the enzymatic protein component of the RNP and therefore an inactive RNP without telomerase activity. We demonstrate here that the J6 internal loop introduces a twist in the RNA structure that may position the entire domain into the catalytic site of the enzyme.
核糖核蛋白酶端粒酶通过延长在每一轮DNA复制过程中丢失的端粒DNA,确保线性染色体末端的稳定性和保真度。所有端粒酶都包含一个与病毒逆转录酶同源的催化蛋白成分(TERT)和一个RNA(TR),该RNA提供模板序列,作为核糖核蛋白组装的支架,并激活酶进行催化。脊椎动物端粒酶RNA包含三个高度保守的结构和功能域:模板域、对酶活性激活至关重要的“CR4-CR5”或“激活”域,以及负责核糖核蛋白组装和成熟的3'-末端“盒式H/ACA”同源域。在这里,我们报告了源自人类端粒酶RNA CR4-CR5域的一个功能必需的RNA结构元件的核磁共振结构。这种RNA,称为hTR J6,形成一个稳定的发夹结构,被一个单核苷酸凸起和一个不对称内环打断。先前关于端粒酶的研究表明,删除hTR J6不对称内环会导致RNA无法结合RNP的酶蛋白成分,因此会产生一个没有端粒酶活性的无活性RNP。我们在此证明,J6内环在RNA结构中引入了一个扭曲,这可能会将整个结构域定位到酶的催化位点。