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全基因组范围内与12号染色体口吃的显著连锁。

Genomewide significant linkage to stuttering on chromosome 12.

作者信息

Riaz Naveeda, Steinberg Stacy, Ahmad Jamil, Pluzhnikov Anna, Riazuddin Sheikh, Cox Nancy J, Drayna Dennis

机构信息

National Institute on Deafness and Other Communication Disorders, National Institutes of Health, Rockville, MD, USA.

出版信息

Am J Hum Genet. 2005 Apr;76(4):647-51. doi: 10.1086/429226. Epub 2005 Feb 15.

Abstract

Stuttering is a common and sometimes severe communication disorder, of unknown primary etiology, that exists in populations worldwide. Many types of evidence suggest a genetic contribution to stuttering; however, the complex inheritance of this disorder has hindered identification of these factors. We have employed highly inbred families to increase the power of linkage analysis of this disorder. Forty-four Pakistani families with documented or probable consanguinity, from the city of Lahore and surrounding areas, were included. Each family contained multiple cases of stuttering, which were diagnosed using the Stuttering Severity Instrument. Using the Marshfield Weber 9 marker panel, we performed a genomewide linkage scan focused on affected individuals and their parents. The analysis included 199 genotyped individuals, 144 affected and 55 unaffected. The Pedigree Relationship Statistical Test (PREST) was used to identify pedigrees that required additional specification of inbreeding. Initial nonparametric analysis gave evidence of linkage on chromosomes 1, 5, 7, and 12. Additional genotyping was performed on chromosome 12 to a 5-cM level of resolution, and 16 additional individuals were then included, bringing the number of families to 46. Analysis of the enlarged data set provided consistent evidence of linkage on chromosome 12: the S(homoz) scoring function gave a nonparametric LOD score of 4.61, and a LOD score of 3.51 was obtained using the S(all) scoring function. These results suggest that a locus on chromosome 12q may contain a gene with a large effect in this sample.

摘要

口吃是一种常见的、有时较为严重的交流障碍,其原发性病因不明,在世界各地的人群中均有存在。多种证据表明遗传因素对口吃有影响;然而,这种疾病复杂的遗传模式阻碍了这些因素的识别。我们采用高度近亲结婚的家庭来提高对这种疾病进行连锁分析的效能。纳入了来自拉合尔市及周边地区的44个有记录或可能存在近亲关系的巴基斯坦家庭。每个家庭都有多个口吃病例,这些病例使用口吃严重程度量表进行诊断。我们使用马什菲尔德·韦伯9标记面板,对受影响个体及其父母进行了全基因组连锁扫描。该分析包括199名基因分型个体,其中144名受影响,55名未受影响。谱系关系统计检验(PREST)用于识别需要进一步明确近亲关系的谱系。最初的非参数分析显示在1号、5号、7号和12号染色体上存在连锁证据。对12号染色体进行了额外的基因分型,分辨率达到5厘摩水平,随后又纳入了16名个体,使家庭数量增至46个。对扩大后的数据集进行分析,提供了12号染色体上存在连锁的一致证据:S(纯合子)评分函数给出的非参数LOD评分为4.61,使用S(所有)评分函数获得的LOD评分为3.51。这些结果表明,在这个样本中,12q染色体上的一个位点可能包含一个具有较大影响的基因。

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