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基于支持向量机和线性判别分析的N-亚硝基化合物致癌性分类

Classification of the carcinogenicity of N-nitroso compounds based on support vector machines and linear discriminant analysis.

作者信息

Luan Feng, Zhang Ruisheng, Zhao Chunyan, Yao Xiaojun, Liu Mancang, Hu Zhide, Fan Botao

机构信息

Department of Chemistry, Lanzhou University, Lanzhou, Gansu 730000, China.

出版信息

Chem Res Toxicol. 2005 Feb;18(2):198-203. doi: 10.1021/tx049782q.

DOI:10.1021/tx049782q
PMID:15720123
Abstract

The support vector machine (SVM), as a novel type of learning machine, was used to develop a classification model of carcinogenic properties of 148 N-nitroso compounds. The seven descriptors calculated solely from the molecular structures of compounds selected by forward stepwise linear discriminant analysis (LDA) were used as inputs of the SVM model. The obtained results confirmed the discriminative capacity of the calculated descriptors. The result of SVM (total accuracy of 95.2%) is better than that of LDA (total accuracy of 89.8%).

摘要

支持向量机(SVM)作为一种新型的学习机器,被用于开发148种N-亚硝基化合物致癌特性的分类模型。通过前向逐步线性判别分析(LDA)选择的仅根据化合物分子结构计算得到的七个描述符被用作SVM模型的输入。所得结果证实了所计算描述符的判别能力。SVM的结果(总准确率为95.2%)优于LDA的结果(总准确率为89.8%)。

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