Smith Christopher Irwin, Farrell Brian D
Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138, USA.
Mol Ecol. 2005 Apr;14(4):1025-44. doi: 10.1111/j.1365-294X.2005.02472.x.
Pollen cores and plant and animal fossils suggest that global climate changes at the end of the last glacial period caused range expansions in organisms indigenous to the North American desert regions, but this suggestion has rarely been investigated from a population genetic perspective. In order to investigate the impact of Pleistocene climate changes and glacial/interglacial cycling on the distribution and population structure of animals in North American desert communities, biogeographical patterns in the flightless, warm-desert cactus beetles, Moneilema gigas and Moneilema armatum, were examined using mitochondrial DNA (mtDNA) sequence data from the cytochrome oxidase I (COI) gene. Gene tree relationships between haplotypes were inferred using parsimony, maximum-likelihood, and Bayesian analysis. Nested clade analysis and coalescent modelling using the programs mdiv and fluctuate were used to identify demographically independent populations, and to test the hypothesis that Pleistocene climate changes caused recent range expansions in these species. A sign test was used to evaluate the probability of observing concerted population growth across multiple, independent populations. The phylogeographical and nested clade analyses reveal a history of northward expansion in both of these species, as well as a history of past range fragmentation, followed by expansion from refugia. The coalescent analyses provide highly significant evidence for independent range expansions from multiple refugia, but also identify biogeographical patterns that predate the most recent glacial period. The results indicate that widespread desert environments are more ancient than has been suggested in the past.
花粉核心以及动植物化石表明,上一个冰川期末期的全球气候变化导致了北美沙漠地区本土生物的分布范围扩大,但这一观点很少从种群遗传学角度进行研究。为了探究更新世气候变化以及冰川/间冰期循环对北美沙漠群落中动物分布和种群结构的影响,研究人员利用来自细胞色素氧化酶I(COI)基因的线粒体DNA(mtDNA)序列数据,对不会飞的暖沙漠仙人掌甲虫——巨瘤长蠹(Moneilema gigas)和武装长蠹(Moneilema armatum)的生物地理模式进行了研究。单倍型之间的基因树关系通过简约法、最大似然法和贝叶斯分析进行推断。利用程序mdiv和fluctuate进行嵌套分支分析和溯祖模型分析,以识别在人口统计学上独立的种群,并检验更新世气候变化导致这些物种近期分布范围扩大这一假设。使用符号检验来评估在多个独立种群中观察到协同种群增长的概率。系统发育地理学和嵌套分支分析揭示了这两个物种向北扩张的历史,以及过去分布范围破碎化随后从避难所扩张的历史。溯祖分析为从多个避难所独立的分布范围扩张提供了高度显著的证据,但也识别出了早于最近冰川期的生物地理模式。结果表明,广泛分布的沙漠环境比过去所认为的更为古老。