Kulkarni Resham D, Thon Michael R, Pan Huaqin, Dean Ralph A
Fungal Genomics Laboratory, Center for Integrated Fungal Research, North Carolina State University, Raleigh, NC 27695, USA.
Genome Biol. 2005;6(3):R24. doi: 10.1186/gb-2005-6-3-r24. Epub 2005 Mar 2.
The G-protein-coupled receptors (GPCRs) are one of the largest protein families in human and other animal genomes, but no more than 10 GPCRs have been characterized in fungi. Do fungi contain only this handful or are there more receptors to be discovered? We asked this question using the recently sequenced genome of the fungal plant pathogen Magnaporthe grisea.
Proteins with significant similarity to fungus-specific and other eukaryotic GPCRs were identified in M. grisea. These included homologs of known fungal GPCRs, the cAMP receptors from Dictyostelium, and a steroid receptor mPR. We also identified a novel class of receptors typified by PTH11, a cell-surface integral membrane protein required for pathogenicity. PTH11 has seven transmembrane regions and an amino-terminal extracellular cysteine-rich EGF-like domain (CFEM domain), a characteristic also seen in human GPCRs. Sixty-one PTH11-related proteins were identified in M. grisea that shared a common domain with homologs in Neurospora crassa and other fungi belonging to this subphylum of the Ascomycota (the Pezizomycotina). None was detected in other fungal groups (Basidiomycota or other Ascomycota subphyla, including yeasts) or any other eukaryote. The subclass of PTH11 containing the CFEM domain is highly represented in M. grisea.
In M. grisea we identified homologs of known GPCRs and a novel class of GPCR-like receptors specific to filamentous ascomycetes. A member of this new class, PTH11, is required for pathogenesis, thus suggesting roles in pathogenicity for other members. The identified classes constitute the largest number of GPCR-like proteins reported in fungi to date.
G 蛋白偶联受体(GPCRs)是人类和其他动物基因组中最大的蛋白质家族之一,但在真菌中已鉴定的 GPCRs 不超过 10 种。真菌中是否仅含有这少数几种 GPCRs,还是有更多的受体有待发现?我们利用最近测序的真菌植物病原体稻瘟病菌的基因组来探讨这个问题。
在稻瘟病菌中鉴定出了与真菌特异性及其他真核生物 GPCRs 具有显著相似性的蛋白质。这些包括已知真菌 GPCRs 的同源物、盘基网柄菌的 cAMP 受体以及类固醇受体 mPR。我们还鉴定出了一类以 PTH11 为代表的新型受体,PTH11 是一种致病性所需的细胞表面整合膜蛋白。PTH11 具有七个跨膜区域和一个富含半胱氨酸的氨基末端细胞外 EGF 样结构域(CFEM 结构域),这一特征在人类 GPCRs 中也可见到。在稻瘟病菌中鉴定出了 61 种与 PTH11 相关的蛋白质,它们与粗糙脉孢菌及属于子囊菌门(粪壳菌纲)这一亚门的其他真菌中的同源物共享一个共同结构域。在其他真菌类群(担子菌门或其他子囊菌亚门,包括酵母)或任何其他真核生物中均未检测到。含有 CFEM 结构域的 PTH11 亚类在稻瘟病菌中高度富集。
在稻瘟病菌中,我们鉴定出了已知 GPCRs 的同源物以及一类丝状子囊菌特有的新型 GPCR 样受体。这一新类别的成员 PTH