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解决伴侣蛋白/外膜蛋白介导的菌毛纤维组装的能量悖论。

Resolving the energy paradox of chaperone/usher-mediated fibre assembly.

作者信息

Zavialov Anton V, Tischenko Vladimir M, Fooks Laura J, Brandsdal Bjørn O, Aqvist Johan, Zav'yalov Vladimir P, Macintyre Sheila, Knight Stefan D

机构信息

Department of Molecular Biology, Uppsala Biomedical Center, Swedish University of Agricultural Sciences, Box 590, SE-753 24 Uppsala, Sweden.

出版信息

Biochem J. 2005 Aug 1;389(Pt 3):685-94. doi: 10.1042/BJ20050426.

DOI:10.1042/BJ20050426
PMID:15799718
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1180718/
Abstract

Periplasmic chaperone/usher machineries are used for assembly of filamentous adhesion organelles of Gram-negative pathogens in a process that has been suggested to be driven by folding energy. Structures of mutant chaperone-subunit complexes revealed a final folding transition (condensation of the subunit hydrophobic core) on the release of organelle subunit from the chaperone-subunit pre-assembly complex and incorporation into the final fibre structure. However, in view of the large interface between chaperone and subunit in the pre-assembly complex and the reported stability of this complex, it is difficult to understand how final folding could release sufficient energy to drive assembly. In the present paper, we show the X-ray structure for a native chaperone-fibre complex that, together with thermodynamic data, shows that the final folding step is indeed an essential component of the assembly process. We show that completion of the hydrophobic core and incorporation into the fibre results in an exceptionally stable module, whereas the chaperone-subunit pre-assembly complex is greatly destabilized by the high-energy conformation of the bound subunit. This difference in stabilities creates a free energy potential that drives fibre formation.

摘要

周质伴侣/组装分子机器用于革兰氏阴性病原体丝状黏附细胞器的组装,这一过程被认为是由折叠能量驱动的。突变型伴侣-亚基复合物的结构显示,在细胞器亚基从伴侣-亚基预组装复合物释放并整合到最终纤维结构时,发生了最终的折叠转变(亚基疏水核心的凝聚)。然而,鉴于预组装复合物中伴侣和亚基之间的大界面以及该复合物报道的稳定性,很难理解最终折叠如何能释放足够的能量来驱动组装。在本文中,我们展示了天然伴侣-纤维复合物的X射线结构,该结构与热力学数据一起表明,最终折叠步骤确实是组装过程的一个重要组成部分。我们表明,疏水核心的完成和整合到纤维中会产生一个异常稳定的模块,而伴侣-亚基预组装复合物则因结合亚基的高能构象而大大不稳定。这种稳定性差异产生了驱动纤维形成的自由能势。

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本文引用的文献

1
Pilus chaperones represent a new type of protein-folding catalyst.菌毛伴侣蛋白是一种新型的蛋白质折叠催化剂。
Nature. 2004 Sep 16;431(7006):329-33. doi: 10.1038/nature02891.
2
An atomic resolution model for assembly, architecture, and function of the Dr adhesins.一种关于Dr黏附素组装、结构和功能的原子分辨率模型。
Mol Cell. 2004 Aug 27;15(4):647-57. doi: 10.1016/j.molcel.2004.08.003.
3
The CCP4 suite: programs for protein crystallography.CCP4软件包:用于蛋白质晶体学的程序。
Acta Crystallogr D Biol Crystallogr. 1994 Sep 1;50(Pt 5):760-3. doi: 10.1107/S0907444994003112.
4
Structure and biogenesis of the capsular F1 antigen from Yersinia pestis: preserved folding energy drives fiber formation.鼠疫耶尔森氏菌荚膜F1抗原的结构与生物合成:保留的折叠能量驱动纤维形成。
Cell. 2003 May 30;113(5):587-96. doi: 10.1016/s0092-8674(03)00351-9.
5
Overexpression, purification, crystallization and preliminary X-ray diffraction analysis of the F1 antigen Caf1M-Caf1 chaperone-subunit pre-assembly complex from Yersinia pestis.鼠疫耶尔森氏菌F1抗原Caf1M-Caf1伴侣亚基预组装复合物的过表达、纯化、结晶及初步X射线衍射分析
Acta Crystallogr D Biol Crystallogr. 2003 Feb;59(Pt 2):359-62. doi: 10.1107/s0907444902021054. Epub 2003 Jan 23.
6
Chaperone priming of pilus subunits facilitates a topological transition that drives fiber formation.菌毛亚基的伴侣引发促进了一种拓扑转变,该转变驱动纤维形成。
Cell. 2002 Nov 15;111(4):543-51. doi: 10.1016/s0092-8674(02)01050-4.
7
Chaperone-independent folding of type 1 pilus domains.1型菌毛结构域的无伴侣蛋白折叠
J Mol Biol. 2002 Sep 27;322(4):827-40. doi: 10.1016/s0022-2836(02)00845-8.
8
Donor strand complementation mechanism in the biogenesis of non-pilus systems.非菌毛系统生物合成中的供体链互补机制。
Mol Microbiol. 2002 Aug;45(4):983-95. doi: 10.1046/j.1365-2958.2002.03066.x.
9
Two-stage polymerase chain reaction protocol allowing introduction of multiple mutations, deletions, and insertions, using QuikChange site-directed mutagenesis.采用QuikChange定点诱变技术的两阶段聚合酶链反应方案,可实现多个突变、缺失和插入的引入。
Methods Mol Biol. 2002;182:37-43. doi: 10.1385/1-59259-194-9:037.
10
Structural and functional similarity between Yersinia pestis capsular protein Caf1 and human interleukin-1 beta.鼠疫耶尔森菌荚膜蛋白Caf1与人类白细胞介素-1β之间的结构和功能相似性。
Biochemistry. 2001 May 22;40(20):6076-84. doi: 10.1021/bi002678x.