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The design and implementation of the immune epitope database and analysis resource.免疫表位数据库及分析资源的设计与实现
Immunogenetics. 2005 Jun;57(5):326-36. doi: 10.1007/s00251-005-0803-5. Epub 2005 May 14.
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The immune epitope database and analysis resource: from vision to blueprint.免疫表位数据库与分析资源:从构想蓝图。 (原英文表述似乎不太完整准确,正常完整句子翻译应该是:免疫表位数据库与分析资源:从构想至蓝图。)
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The Immune Epitope Database and Analysis Resource Program 2003-2018: reflections and outlook.免疫表位数据库和分析资源计划 2003-2018:反思与展望。
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The Immune Epitope Database and Analysis Resource Program 2003-2018: reflections and outlook.免疫表位数据库和分析资源计划 2003-2018:反思与展望。
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本文引用的文献

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IMGT-Choreography for immunogenetics and immunoinformatics.免疫遗传学和免疫信息学的IMGT编排
In Silico Biol. 2005;5(1):45-60.
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IMGT, the international ImMunoGeneTics information system.国际免疫基因信息系统(IMGT)
Nucleic Acids Res. 2005 Jan 1;33(Database issue):D593-7. doi: 10.1093/nar/gki065.
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Post-proteasomal antigen processing for major histocompatibility complex class I presentation.用于主要组织相容性复合体I类呈递的蛋白酶体后抗原加工。
Nat Immunol. 2004 Jul;5(7):670-7. doi: 10.1038/ni1089.
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Generation of major histocompatibility complex class I antigens: functional interplay between proteasomes and TPPII.主要组织相容性复合体I类抗原的产生:蛋白酶体与TPPII之间的功能相互作用。
Nat Immunol. 2004 Jul;5(7):661-9. doi: 10.1038/ni1090.
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How do we avoid developing allergy: modifications of the TH2 response from a B-cell perspective.我们如何避免发生过敏:从B细胞角度看TH2反应的调节
J Allergy Clin Immunol. 2004 May;113(5):983-6. doi: 10.1016/j.jaci.2004.02.046.
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Prediction of protein-protein interactions: the CAPRI experiment, its evaluation and implications.蛋白质-蛋白质相互作用的预测:CAPRI实验、其评估及意义。
Curr Opin Struct Biol. 2004 Apr;14(2):242-9. doi: 10.1016/j.sbi.2004.02.003.
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IMGT-ONTOLOGY for immunogenetics and immunoinformatics.免疫遗传学和免疫信息学的IMGT本体论。
In Silico Biol. 2004;4(1):17-29. Epub 2003 Nov 22.
8
A major role for TPPII in trimming proteasomal degradation products for MHC class I antigen presentation.TPPII在修剪蛋白酶体降解产物以进行MHC I类抗原呈递中起主要作用。
Immunity. 2004 Apr;20(4):495-506. doi: 10.1016/s1074-7613(04)00074-3.
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Protein-protein docking: is the glass half-full or half-empty?蛋白质-蛋白质对接:是杯满一半还是空一半?
Trends Biotechnol. 2004 Mar;22(3):110-6. doi: 10.1016/j.tibtech.2004.01.006.
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Results of clinical trials with an allogenic melanoma tumor cell lysate vaccine: Melacine.使用同种异体黑色素瘤肿瘤细胞裂解物疫苗Melacine的临床试验结果。
Semin Cancer Biol. 2003 Dec;13(6):409-15. doi: 10.1016/j.semcancer.2003.09.004.

免疫表位数据库及分析资源的设计与实现

The design and implementation of the immune epitope database and analysis resource.

作者信息

Peters Bjoern, Sidney John, Bourne Phil, Bui Huynh-Hoa, Buus Soeren, Doh Grace, Fleri Ward, Kronenberg Mitch, Kubo Ralph, Lund Ole, Nemazee David, Ponomarenko Julia V, Sathiamurthy Muthu, Schoenberger Stephen P, Stewart Scott, Surko Pamela, Way Scott, Wilson Steve, Sette Alessandro

机构信息

La Jolla Institute of Allergy and Immunology, 3030 Bunker Hill Street, Suite 326, San Diego, CA 92109, USA.

出版信息

Immunogenetics. 2005 Jun;57(5):326-36. doi: 10.1007/s00251-005-0803-5. Epub 2005 May 14.

DOI:10.1007/s00251-005-0803-5
PMID:15895191
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4780685/
Abstract

Epitopes are defined as parts of antigens interacting with receptors of the immune system. Knowledge about their intrinsic structure and how they affect the immune response is required to continue development of techniques that detect, monitor, and fight diseases. Their scientific importance is reflected in the vast amount of epitope-related information gathered, ranging from interactions between epitopes and major histocompatibility complex molecules determined by X-ray crystallography to clinical studies analyzing correlates of protection for epitope based vaccines. Our goal is to provide a central resource capable of capturing this information, allowing users to access and connect realms of knowledge that are currently separated and difficult to access. Here, we portray a new initiative, "The Immune Epitope Database and Analysis Resource." We describe how we plan to capture, structure, and store this information, what query interfaces we will make available to the public, and what additional predictive and analytical tools we will provide.

摘要

表位被定义为抗原中与免疫系统受体相互作用的部分。要继续开发检测、监测和对抗疾病的技术,就需要了解它们的内在结构以及它们如何影响免疫反应。它们的科学重要性体现在收集到的大量与表位相关的信息中,从通过X射线晶体学确定的表位与主要组织相容性复合体分子之间的相互作用,到分析基于表位的疫苗保护相关性的临床研究。我们的目标是提供一个能够收集这些信息的核心资源,让用户能够访问并连接目前相互分离且难以获取的知识领域。在此,我们介绍一项新计划,即“免疫表位数据库与分析资源”。我们描述了我们计划如何捕获、构建和存储这些信息,将向公众提供哪些查询界面,以及我们将提供哪些额外的预测和分析工具。