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通过定量蛋白质免疫印迹分析和透射电子显微镜对嗜水气单胞菌H16中瞬时聚羟基丁酸酯产量的分析。

Analysis of transient polyhydroxybutyrate production in Wautersia eutropha H16 by quantitative Western analysis and transmission electron microscopy.

作者信息

Tian Jiamin, He Aimin, Lawrence Adam G, Liu Pinghua, Watson Nicki, Sinskey Anthony J, Stubbe Joanne

机构信息

Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Ave., Cambridge, Massachusetts 02139, USA.

出版信息

J Bacteriol. 2005 Jun;187(11):3825-32. doi: 10.1128/JB.187.11.3825-3832.2005.

Abstract

Polyhydroxybutyrates (PHBs) are polyoxoesters generated from (R)3-hydroxybutyryl coenzyme A by PHB synthase. During the polymerization reaction, the polymers undergo a phase transition and generate granules. Wautersia eutropha can transiently accumulate PHB when it is grown in a nutrient-rich medium (up to 23% of the cell dry weight in dextrose-free tryptic soy broth [TSB]). PHB homeostasis under these growth conditions was examined by quantitative Western analysis to monitor the proteins present, their levels, and changes in their levels over a 48-h growth period. The proteins examined include PhaC (the synthase), PhaP (a phasin), PhaR (a transcription factor), and PhaZ1(a), PhaZ1(b), and PhaZ1(c) (putative intracellular depolymerases), as well as PhaZ2 (a hydroxybutyrate oligomer hydrolase). The results show that PhaC and PhaZ1(a) were present simultaneously. No PhaZ1(b) or PhaZ1(c) was detected at any time throughout growth. PhaZ2 was observed and exhibited an expression pattern different from that of PhaZ1(a). The levels of PhaP changed dramatically and corresponded kinetically to the levels of PHB. Transmission electron microscopy (TEM) provided the dimensions of the average cell and the average granule at 4 h and 24 h of growth (J. Tian, A. J. Sinskey, and J. Stubbe, J. Bacteriol. 187:3814-3824, 2005). This information allowed us to calculate the amount of each protein and number of granules per cell and the granule surface coverage by proteins. The molecular mass of PHB (10(6) Da) was determined by dynamic light scattering at 4 h, the time of maximum PHB accumulation. At this time, the surface area of the granules was maximally covered with PhaP (27 to 54%), and there were one or two PhaP molecules/PHB chain. The ratio of PHB chains to PhaC was approximately 60, which required reinitiation of polymer formation on PhaC. The TEM studies of wild-type and deltaphaR strains in TSB provided further support for an alternative mechanism of granule formation.

摘要

聚羟基丁酸酯(PHB)是由PHB合酶从(R)-3-羟基丁酰辅酶A生成的聚氧酯。在聚合反应过程中,聚合物会发生相变并形成颗粒。嗜水气单胞菌在富含营养的培养基中生长时可短暂积累PHB(在无葡萄糖的胰蛋白胨大豆肉汤[TSB]中可达细胞干重的23%)。通过定量蛋白质免疫印迹分析来检测这些生长条件下的PHB稳态,以监测所存在的蛋白质、它们的水平以及在48小时生长期间其水平的变化。所检测的蛋白质包括PhaC(合酶)、PhaP(一种phasins蛋白)、PhaR(一种转录因子)、PhaZ1(a)、PhaZ1(b)和PhaZ1(c)(推定的细胞内解聚酶),以及PhaZ2(一种羟基丁酸寡聚物水解酶)。结果表明,PhaC和PhaZ1(a)同时存在。在整个生长过程中的任何时候都未检测到PhaZ1(b)或PhaZ1(c)。观察到PhaZ2,其表达模式与PhaZ1(a)不同。PhaP的水平发生了显著变化,并且在动力学上与PHB的水平相对应。透射电子显微镜(TEM)提供了生长4小时和24小时时平均细胞和平均颗粒的尺寸(J. Tian、A. J. Sinskey和J. Stubbe,《细菌学杂志》187:3814 - 3824,2005年)。这些信息使我们能够计算每个细胞中每种蛋白质的量、颗粒数量以及蛋白质对颗粒表面的覆盖率。在PHB积累达到最大值的4小时时,通过动态光散射测定了PHB的分子量(10^6 Da)。此时,颗粒表面最大程度地被PhaP覆盖(27%至54%),并且每条PHB链有一到两个PhaP分子。PHB链与PhaC的比例约为60,这需要在PhaC上重新启动聚合物形成。在TSB中对野生型和deltaphaR菌株进行的TEM研究为颗粒形成的另一种机制提供了进一步的支持。

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