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本文引用的文献

1
Analysis of transient polyhydroxybutyrate production in Wautersia eutropha H16 by quantitative Western analysis and transmission electron microscopy.通过定量蛋白质免疫印迹分析和透射电子显微镜对嗜水气单胞菌H16中瞬时聚羟基丁酸酯产量的分析。
J Bacteriol. 2005 Jun;187(11):3825-32. doi: 10.1128/JB.187.11.3825-3832.2005.
2
Detection of intermediates from the polymerization reaction catalyzed by a D302A mutant of class III polyhydroxyalkanoate (PHA) synthase.检测由III类聚羟基脂肪酸酯(PHA)合酶的D302A突变体催化的聚合反应中的中间体。
Biochemistry. 2005 Feb 8;44(5):1495-503. doi: 10.1021/bi047734z.
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The cellulosomes: multienzyme machines for degradation of plant cell wall polysaccharides.纤维小体:用于降解植物细胞壁多糖的多酶机器
Annu Rev Microbiol. 2004;58:521-54. doi: 10.1146/annurev.micro.57.030502.091022.
4
Hydrophilic domains of scaffolding protein CbpA promote glycosyl hydrolase activity and localization of cellulosomes to the cell surface of Clostridium cellulovorans.支架蛋白CbpA的亲水区促进糖基水解酶活性以及纤维小体在嗜纤维梭菌细胞表面的定位。
J Bacteriol. 2004 Oct;186(19):6351-9. doi: 10.1128/JB.186.19.6351-6359.2004.
5
Ruminococcus albus 8 mutants defective in cellulose degradation are deficient in two processive endocellulases, Cel48A and Cel9B, both of which possess a novel modular architecture.在纤维素降解方面存在缺陷的白色瘤胃球菌8突变体缺乏两种连续性内切纤维素酶,即Cel48A和Cel9B,这两种酶都具有一种新颖的模块化结构。
J Bacteriol. 2004 Jan;186(1):136-45. doi: 10.1128/JB.186.1.136-145.2004.
6
Polyhydroxyalkanoate (PHA) hemeostasis: the role of PHA synthase.聚羟基脂肪酸酯(PHA)稳态:PHA合酶的作用
Nat Prod Rep. 2003 Oct;20(5):445-57. doi: 10.1039/b209687k.
7
STRUCTURE OF POLY-BETA-HYDROXYBUTYRIC ACID GRANULES.聚-β-羟基丁酸颗粒的结构
J Gen Microbiol. 1964 Mar;34:441-6. doi: 10.1099/00221287-34-3-441.
8
OBSERVATIONS ON THE FINE STRUCTURE OF SPHEROPLASTS OF RHODOSPIRILLUM RUBRUM.深红红螺菌球状体精细结构的观察
J Cell Biol. 1964 Feb;20(2):297-311. doi: 10.1083/jcb.20.2.297.
9
Preliminary analysis of polyhydroxyalkanoate inclusions using atomic force microscopy.使用原子力显微镜对聚羟基脂肪酸酯内含物进行初步分析。
FEMS Microbiol Lett. 2003 Sep 12;226(1):113-9. doi: 10.1016/S0378-1097(03)00610-4.
10
Ralstonia eutropha H16 encodes two and possibly three intracellular Poly[D-(-)-3-hydroxybutyrate] depolymerase genes.真养产碱杆菌H16编码两个,可能还有三个细胞内聚[D-(-)-3-羟基丁酸酯]解聚酶基因。
J Bacteriol. 2003 Jul;185(13):3788-94. doi: 10.1128/JB.185.13.3788-3794.2003.

利用透射电子显微镜对嗜水气单胞菌H16中聚羟基丁酸酯颗粒形成的动力学研究。

Kinetic studies of polyhydroxybutyrate granule formation in Wautersia eutropha H16 by transmission electron microscopy.

作者信息

Tian Jiamin, Sinskey Anthony J, Stubbe Joanne

机构信息

Department of Chemistry, Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.

出版信息

J Bacteriol. 2005 Jun;187(11):3814-24. doi: 10.1128/JB.187.11.3814-3824.2005.

DOI:10.1128/JB.187.11.3814-3824.2005
PMID:15901706
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1112049/
Abstract

Wautersia eutropha, formerly known as Ralstonia eutropha, a gram-negative bacterium, accumulates polyhydroxybutyrate (PHB) as insoluble granules inside the cell when nutrients other than carbon are limited. In this paper, we report findings from kinetic studies of granule formation and degradation in W. eutropha H16 obtained using transmission electron microscopy (TEM). In nitrogen-limited growth medium, the phenotype of the cells at the early stages of granule formation was revealed for the first time. At the center of the cells, dark-stained "mediation elements" with small granules attached were observed. These mediation elements are proposed to serve as nucleation sites for granule initiation. TEM images also revealed that when W. eutropha cells were introduced into nitrogen-limited medium from nutrient-rich medium, the cell size increased two- to threefold, and the cells underwent additional volume changes during growth. Unbiased stereology was used to analyze the two-dimensional TEM images, from which the average volume of a W. eutropha H16 cell and the total surface area of granules per cell in nutrient-rich and PHB production media were obtained. These parameters were essential in the calculation of the concentration of proteins involved in PHB formation and utilization and their changes with time. The extent of protein coverage of the granule surface area is presented in the accompanying paper.

摘要

真养产碱菌(Wautersia eutropha),以前称为嗜麦芽寡养单胞菌(Ralstonia eutropha),是一种革兰氏阴性菌,当除碳以外的营养物质有限时,它会在细胞内积累聚羟基丁酸酯(PHB)作为不溶性颗粒。在本文中,我们报告了使用透射电子显微镜(TEM)对真养产碱菌H16颗粒形成和降解的动力学研究结果。在氮限制生长培养基中,首次揭示了颗粒形成早期细胞的表型。在细胞中心,观察到附着有小颗粒的深色“介导元件”。这些介导元件被认为是颗粒起始的成核位点。TEM图像还显示,当真养产碱菌细胞从营养丰富的培养基引入氮限制培养基时,细胞大小增加了两到三倍,并且细胞在生长过程中经历了额外的体积变化。使用无偏体视学分析二维TEM图像,从中获得了真养产碱菌H16细胞的平均体积以及营养丰富培养基和PHB生产培养基中每个细胞颗粒的总表面积。这些参数对于计算参与PHB形成和利用的蛋白质浓度及其随时间的变化至关重要。颗粒表面积的蛋白质覆盖程度在随附的论文中给出。