源自人类猫肉瘤癌基因Fes的Src同源2结构域的溶液结构。 - Suppr

Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes.

作者信息

Scott Anna, Pantoja-Uceda David, Koshiba Seizo, Inoue Makoto, Kigawa Takanori, Terada Takaho, Shirouzu Mikako, Tanaka Akiko, Sugano Sumio, Yokoyama Shigeyuki, Güntert Peter

机构信息

Tatsuo Miyazawa Memorial Program, RIKEN Genomic Sciences Center, Tsurumi, Yokohama, Japan.

出版信息

J Biomol NMR. 2005 Apr;31(4):357-61. doi: 10.1007/s10858-005-0946-6.

DOI:10.1007/s10858-005-0946-6

PMID:15929003

Abstract

摘要

相似文献

Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes.

J Biomol NMR. 2005 Apr;31(4):357-61. doi: 10.1007/s10858-005-0946-6.

NMR assignment of the SH2 domain from the human feline sarcoma oncogene FES.

J Biomol NMR. 2004 Dec;30(4):463-4. doi: 10.1007/s10858-004-5432-z.

Src homology 2 domain substitution modulates the kinase and transforming activities of the Fes protein-tyrosine kinase.

Cell Growth Differ. 2000 Nov;11(11):581-92.

Regulation of the human c-fes protein tyrosine kinase (p93c-fes) by its src homology 2 domain and major autophosphorylation site (Tyr-713).

Oncogene. 1993 Aug;8(8):2283-92.

Solution structure and phosphopeptide binding of the SH2 domain from the human Bruton's tyrosine kinase.

J Biomol NMR. 2006 Sep;36(1):73-8. doi: 10.1007/s10858-006-9064-3. Epub 2006 Sep 13.

Solution structure of the human Hck SH3 domain and identification of its ligand binding site.

J Mol Biol. 1998 Apr 24;278(1):253-65. doi: 10.1006/jmbi.1998.1690.

Regulation of c-Fes tyrosine kinase activity by coiled-coil and SH2 domains: analysis with Saccharomyces cerevisiae.

Biochemistry. 2003 Apr 1;42(12):3567-74. doi: 10.1021/bi0272499.

Fully automated structure determinations of the Fes SH2 domain using different sets of NMR spectra.

Magn Reson Chem. 2006 Jul;44 Spec No:S83-8. doi: 10.1002/mrc.1813.

Src structure crystallizes 20 years of oncogene research.

Science. 1997 Feb 21;275(5303):1066. doi: 10.1126/science.275.5303.1066.

Crystal structure of the Src family tyrosine kinase Hck.

Nature. 1997 Feb 13;385(6617):602-9. doi: 10.1038/385602a0.

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Systematic evaluation of combined automated NOE assignment and structure calculation with CYANA.

J Biomol NMR. 2015 May;62(1):81-95. doi: 10.1007/s10858-015-9921-z. Epub 2015 Mar 22.

Prediction of peak overlap in NMR spectra.

J Biomol NMR. 2013 Jun;56(2):113-23. doi: 10.1007/s10858-013-9727-9. Epub 2013 Apr 13.

Peakmatch: a simple and robust method for peak list matching.

J Biomol NMR. 2013 Mar;55(3):267-77. doi: 10.1007/s10858-013-9708-z. Epub 2013 Jan 18.

Simultaneous single-structure and bundle representation of protein NMR structures in torsion angle space.

J Biomol NMR. 2012 Apr;52(4):351-64. doi: 10.1007/s10858-012-9615-8. Epub 2012 Feb 22.

Objective identification of residue ranges for the superposition of protein structures.

BMC Bioinformatics. 2011 May 18;12:170. doi: 10.1186/1471-2105-12-170.

Automated structure determination from NMR spectra.

Eur Biophys J. 2009 Feb;38(2):129-43. doi: 10.1007/s00249-008-0367-z. Epub 2008 Sep 20.

Expression, purification and preliminary crystallographic studies on the catalytic region of the nonreceptor tyrosine kinase Fes.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Jan 1;63(Pt 1):18-20. doi: 10.1107/S1744309106051682. Epub 2006 Dec 16.

本文引用的文献

NMR View: A computer program for the visualization and analysis of NMR data.

J Biomol NMR. 1994 Sep;4(5):603-14. doi: 10.1007/BF00404272.

NMR assignment of the SH2 domain from the human feline sarcoma oncogene FES.

J Biomol NMR. 2004 Dec;30(4):463-4. doi: 10.1007/s10858-004-5432-z.

Regulation of c-Fes tyrosine kinase activity by coiled-coil and SH2 domains: analysis with Saccharomyces cerevisiae.

Biochemistry. 2003 Apr 1;42(12):3567-74. doi: 10.1021/bi0272499.

A software tool for the prediction of Xaa-Pro peptide bond conformations in proteins based on 13C chemical shift statistics.

J Biomol NMR. 2002 Oct;24(2):149-54. doi: 10.1023/a:1020997118364.

Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

J Mol Biol. 2002 May 24;319(1):209-27. doi: 10.1016/s0022-2836(02)00241-3.

Structural genomics projects in Japan.

Nat Struct Biol. 2000 Nov;7 Suppl:943-5. doi: 10.1038/80712.

Src homology 2 domain substitution modulates the kinase and transforming activities of the Fes protein-tyrosine kinase.

Cell Growth Differ. 2000 Nov;11(11):581-92.

Torsion angle dynamics for NMR structure calculation with the new program DYANA.

J Mol Biol. 1997 Oct 17;273(1):283-98. doi: 10.1006/jmbi.1997.1284.

AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR.

J Biomol NMR. 1996 Dec;8(4):477-86. doi: 10.1007/BF00228148.

MOLMOL: a program for display and analysis of macromolecular structures.

J Mol Graph. 1996 Feb;14(1):51-5, 29-32. doi: 10.1016/0263-7855(96)00009-4.

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Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes.

作者信息

Scott Anna, Pantoja-Uceda David, Koshiba Seizo, Inoue Makoto, Kigawa Takanori, Terada Takaho, Shirouzu Mikako, Tanaka Akiko, Sugano Sumio, Yokoyama Shigeyuki, Güntert Peter

机构信息

Tatsuo Miyazawa Memorial Program, RIKEN Genomic Sciences Center, Tsurumi, Yokohama, Japan.

出版信息

J Biomol NMR. 2005 Apr;31(4):357-61. doi: 10.1007/s10858-005-0946-6.

DOI:10.1007/s10858-005-0946-6

PMID:15929003

Abstract

摘要

相似文献

Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes.

J Biomol NMR. 2005 Apr;31(4):357-61. doi: 10.1007/s10858-005-0946-6.

NMR assignment of the SH2 domain from the human feline sarcoma oncogene FES.

J Biomol NMR. 2004 Dec;30(4):463-4. doi: 10.1007/s10858-004-5432-z.

Src homology 2 domain substitution modulates the kinase and transforming activities of the Fes protein-tyrosine kinase.

Cell Growth Differ. 2000 Nov;11(11):581-92.

Regulation of the human c-fes protein tyrosine kinase (p93c-fes) by its src homology 2 domain and major autophosphorylation site (Tyr-713).

Oncogene. 1993 Aug;8(8):2283-92.

Solution structure and phosphopeptide binding of the SH2 domain from the human Bruton's tyrosine kinase.

J Biomol NMR. 2006 Sep;36(1):73-8. doi: 10.1007/s10858-006-9064-3. Epub 2006 Sep 13.

Solution structure of the human Hck SH3 domain and identification of its ligand binding site.

J Mol Biol. 1998 Apr 24;278(1):253-65. doi: 10.1006/jmbi.1998.1690.

Regulation of c-Fes tyrosine kinase activity by coiled-coil and SH2 domains: analysis with Saccharomyces cerevisiae.

Biochemistry. 2003 Apr 1;42(12):3567-74. doi: 10.1021/bi0272499.

Fully automated structure determinations of the Fes SH2 domain using different sets of NMR spectra.

Magn Reson Chem. 2006 Jul;44 Spec No:S83-8. doi: 10.1002/mrc.1813.

Src structure crystallizes 20 years of oncogene research.

Science. 1997 Feb 21;275(5303):1066. doi: 10.1126/science.275.5303.1066.

Crystal structure of the Src family tyrosine kinase Hck.

Nature. 1997 Feb 13;385(6617):602-9. doi: 10.1038/385602a0.

引用本文的文献

The 100-protein NMR spectra dataset: A resource for biomolecular NMR data analysis.

Sci Data. 2024 Jan 4;11(1):30. doi: 10.1038/s41597-023-02879-5.

Evaluation of Multi-Objective Optimization Algorithms for NMR Chemical Shift Assignment.

Molecules. 2021 Jun 17;26(12):3699. doi: 10.3390/molecules26123699.

Peak picking multidimensional NMR spectra with the contour geometry based algorithm CYPICK.

J Biomol NMR. 2017 Jan;67(1):63-76. doi: 10.1007/s10858-016-0084-3. Epub 2017 Feb 3.

Systematic evaluation of combined automated NOE assignment and structure calculation with CYANA.

J Biomol NMR. 2015 May;62(1):81-95. doi: 10.1007/s10858-015-9921-z. Epub 2015 Mar 22.

Prediction of peak overlap in NMR spectra.

J Biomol NMR. 2013 Jun;56(2):113-23. doi: 10.1007/s10858-013-9727-9. Epub 2013 Apr 13.

Peakmatch: a simple and robust method for peak list matching.

J Biomol NMR. 2013 Mar;55(3):267-77. doi: 10.1007/s10858-013-9708-z. Epub 2013 Jan 18.

Simultaneous single-structure and bundle representation of protein NMR structures in torsion angle space.

J Biomol NMR. 2012 Apr;52(4):351-64. doi: 10.1007/s10858-012-9615-8. Epub 2012 Feb 22.

Objective identification of residue ranges for the superposition of protein structures.

BMC Bioinformatics. 2011 May 18;12:170. doi: 10.1186/1471-2105-12-170.

Automated structure determination from NMR spectra.

Eur Biophys J. 2009 Feb;38(2):129-43. doi: 10.1007/s00249-008-0367-z. Epub 2008 Sep 20.

Expression, purification and preliminary crystallographic studies on the catalytic region of the nonreceptor tyrosine kinase Fes.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Jan 1;63(Pt 1):18-20. doi: 10.1107/S1744309106051682. Epub 2006 Dec 16.

本文引用的文献

NMR View: A computer program for the visualization and analysis of NMR data.

J Biomol NMR. 1994 Sep;4(5):603-14. doi: 10.1007/BF00404272.

NMR assignment of the SH2 domain from the human feline sarcoma oncogene FES.

J Biomol NMR. 2004 Dec;30(4):463-4. doi: 10.1007/s10858-004-5432-z.

Regulation of c-Fes tyrosine kinase activity by coiled-coil and SH2 domains: analysis with Saccharomyces cerevisiae.

Biochemistry. 2003 Apr 1;42(12):3567-74. doi: 10.1021/bi0272499.

A software tool for the prediction of Xaa-Pro peptide bond conformations in proteins based on 13C chemical shift statistics.

J Biomol NMR. 2002 Oct;24(2):149-54. doi: 10.1023/a:1020997118364.

Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

J Mol Biol. 2002 May 24;319(1):209-27. doi: 10.1016/s0022-2836(02)00241-3.

Structural genomics projects in Japan.

Nat Struct Biol. 2000 Nov;7 Suppl:943-5. doi: 10.1038/80712.

Src homology 2 domain substitution modulates the kinase and transforming activities of the Fes protein-tyrosine kinase.

Cell Growth Differ. 2000 Nov;11(11):581-92.

Torsion angle dynamics for NMR structure calculation with the new program DYANA.

J Mol Biol. 1997 Oct 17;273(1):283-98. doi: 10.1006/jmbi.1997.1284.

AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR.

J Biomol NMR. 1996 Dec;8(4):477-86. doi: 10.1007/BF00228148.

MOLMOL: a program for display and analysis of macromolecular structures.

J Mol Graph. 1996 Feb;14(1):51-5, 29-32. doi: 10.1016/0263-7855(96)00009-4.

Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes.

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Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes.

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