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应用多重聚合酶链反应快速检测和鉴别临床样本中的牛疱疹病毒1型和5型糖蛋白C基因

Rapid detection and differentiation of bovine herpesvirus 1 and 5 glycoprotein C gene in clinical specimens by multiplex-PCR.

作者信息

Claus Marlise Pompeo, Alfieri Alice Fernandes, Folgueras-Flatschart Aurea Valadares, Wosiacki Sheila Rezler, Médici Kerlei Cristina, Alfieri Amauri Alcindo

机构信息

Laboratório de Virologia Animal, Departamento de Medicina Veterinária Preventiva, Centro de Ciências Agrárias, Universidade Estadual de Londrina (UEL), Londrina/PR, Brazil.

出版信息

J Virol Methods. 2005 Sep;128(1-2):183-8. doi: 10.1016/j.jviromet.2005.05.001.

Abstract

A multiplex polymerase chain reaction (multiplex-PCR) to detect and differentiate bovine herpesvirus 1 (BoHV-1) and 5 (BoHV-5) was developed using primers for the gene sequence that encodes the glycoprotein C. The technique was assessed against the BoHV-1 and BoHV-5 cell culture adapted strains, and clinical samples collected from animals with clinical signs of BoHV-1 (n = 10) or BoHV-5 (n = 7) infection and with diagnosis confirmed by virus isolation in cell culture and semi-nested PCR. Fifteen clinical samples from asymptomatic animals were included as control group. For the evaluation of the amplifiability of the extracted nucleic acid from clinical specimens was included a bovine internal control that amplified a 626 bp fragment of the ND5 gene present in the bovine mitochondrial DNA. For DNA extraction, a combination of the phenol/chloroform/isoamyl alcohol and silica/guanidine isothiocyanate methods was used. The specificity of the BoHV-1 and BoHV-5 amplicons from standard strains were confirmed by sequence analysis. All the positive clinical samples for BoHV included in this study were characterized as BoHV-1 or BoHV-5 by the difference in length of the amplified product visualized in a agarose gel (354 bp size for BoHV-1, and 159 bp for BoHV-5). The internal control was amplified in all clinical specimens. Non-specific reactions were not observed when the multiplex-PCR was assessed with other viruses (bovine viral diarrhea virus and rabies virus) and BoHV-negative clinical samples from fetuses and adult cattle obtained from a slaughterhouse.

摘要

利用编码糖蛋白C的基因序列引物,开发了一种用于检测和区分牛疱疹病毒1型(BoHV-1)和5型(BoHV-5)的多重聚合酶链反应(多重PCR)。该技术针对BoHV-1和BoHV-5细胞培养适应株,以及从有BoHV-1(n = 10)或BoHV-5(n = 7)感染临床症状且经细胞培养病毒分离和半巢式PCR确诊的动物采集的临床样本进行了评估。将来自无症状动物的15份临床样本作为对照组。为了评估从临床标本中提取的核酸的可扩增性,纳入了一个牛内对照,该对照扩增牛线粒体DNA中存在的ND5基因的626 bp片段。对于DNA提取,使用了苯酚/氯仿/异戊醇和二氧化硅/异硫氰酸胍方法的组合。通过序列分析确认了标准株的BoHV-1和BoHV-5扩增子的特异性。本研究中纳入的所有BoHV阳性临床样本通过在琼脂糖凝胶中可视化的扩增产物长度差异被鉴定为BoHV-1或BoHV-5(BoHV-1的大小为354 bp,BoHV-5的大小为159 bp)。所有临床标本中均扩增出内对照。当用其他病毒(牛病毒性腹泻病毒和狂犬病病毒)以及从屠宰场获得的胎儿和成年牛的BoHV阴性临床样本评估多重PCR时,未观察到非特异性反应。

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