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一种基于密度的根系结构建模方法:在海岸松(Pinus pinaster Ait.)根系系统中的应用。

A density-based approach for the modelling of root architecture: application to Maritime pine (Pinus pinaster Ait.) root systems.

作者信息

Dupuy L, Fourcaud T, Stokes A, Danjon F

机构信息

Laboratoire de Rhéologie du Bois de Bordeaux, Mixed unit CNRS, INRA, Université Bordeaux I, Domaine de l'Hermitage 69 route d'Arcachon 33612 Cestas Cedex, France.

出版信息

J Theor Biol. 2005 Oct 7;236(3):323-34. doi: 10.1016/j.jtbi.2005.03.013.

Abstract

Root morphology influences strongly plant/soil interactions. However, the complexity of root architecture is a major barrier when analysing many phenomena, e.g. anchorage, water or nutrient uptake. Therefore, we have developed a new approach for the representation and modelling of root architecture based on branching density. A general root branching density in a space of finite dimension was used and enabled us to consider various morphological properties. A root system model was then constructed which minimizes the difference between measured and simulated root systems, expressed with functions which map root density in the soil. The model was tested in 2D using data from Maritime pine Pinus pinaster Ait. structural roots as input. We showed that simulated and real root systems had similar root distributions in terms of radial distance, depth, branching angle and branching order. These results indicate that general density functions are not only a powerful basis for constructing models of architecture, but can also be used to represent such structures when considering root/soil interaction. These models are particularly useful in that they provide a local morphological characterization which is aggregated in a given unit of soil volume.

摘要

根系形态对植物与土壤的相互作用有很大影响。然而,在分析许多现象(如固着、水分或养分吸收)时,根系结构的复杂性是一个主要障碍。因此,我们基于分支密度开发了一种新的根系结构表示和建模方法。使用有限维空间中的一般根系分支密度,这使我们能够考虑各种形态特征。然后构建了一个根系模型,该模型最小化了实测根系与模拟根系之间的差异,差异用映射土壤中根系密度的函数表示。该模型在二维中使用来自海岸松(Pinus pinaster Ait.)结构根的数据作为输入进行了测试。我们表明,在径向距离、深度、分支角度和分支顺序方面,模拟根系和真实根系具有相似的根系分布。这些结果表明,一般密度函数不仅是构建结构模型的有力基础,而且在考虑根系与土壤相互作用时也可用于表示此类结构。这些模型特别有用,因为它们提供了在给定土壤体积单元中汇总的局部形态特征描述。

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