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[基于启动子DNA静电模式的大肠杆菌基因组上sigma70特异性启动子组织的一些原则]

[Some principles in the organization of sigma70-specific promoters on the E. coli genome on the basis of electrostatic patterns of promoter DNA].

作者信息

Kamzolova S G, Sorokin A A, Osipov A A, Beskaravaĭnyĭ P M

出版信息

Biofizika. 2005 May-Jun;50(3):444-9.

Abstract

The distribution of electrostatic potential of the complete sequence of the E. coli genome was calculated. It was found that DNA is not a uniformly charged molecule. There are some local inhomogeneities in its electrostatic profile, which correlate with the position of promoters in the genome. Electrostatic patterns of promoter DNAs can be specified due to the presence of some distinctive motifs, which may be involved as promoter signal elements in RNA-polymerase-promoter recognition.

摘要

计算了大肠杆菌基因组完整序列的静电势分布。发现DNA不是一个电荷均匀分布的分子。其静电分布存在一些局部不均匀性,这与基因组中启动子的位置相关。启动子DNA的静电模式可以通过一些独特基序的存在来确定,这些基序可能作为启动子信号元件参与RNA聚合酶与启动子的识别。

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