Veresov V G, Konev S V
Biofizika. 2005 May-Jun;50(3):480-7.
The dynamics of the inositol-1,4,5-triphosphate-sensitive calcium channel after binding of inositol-1,4,5-triphosphate and Ca2+ was analyzed by the Monte Carlo minimization technique. It was shown that the binding of Ca2+ with the unliganded receptor (channel) leads to a turning of the beta-sheet domain relative to the alpha-helical domain with the formation of the receptor conformation that is open for the entry of ions into the cytoplasmic channel vestibule, sterically closed for their passage through the vestibule in the part adjacent to the alpha-helical domains, and unfavourable for subsequent binding of inositol-1,4,5-triphosphate with the receptor. When both co-agonists bind to the receptor, the structure rearrangements induced eliminate both these steric obstacles for the passage of ions through the IP3-binding domain: one at the entrance of the channel cytoplasmic vestibule and the other that is placed deeper in the vestibule near the alpha-domains. The role of the dynamics of the receptor binding core in the IP3-sensitive channel gating is discussed.
采用蒙特卡罗最小化技术分析了肌醇-1,4,5-三磷酸(IP3)和Ca2+结合后IP3敏感钙通道的动力学。结果表明,Ca2+与未结合配体的受体(通道)结合会导致β折叠结构域相对于α螺旋结构域发生转动,形成一种受体构象,该构象对离子进入细胞质通道前庭是开放的,但在与α螺旋结构域相邻的部分,离子通过前庭时在空间上是封闭的,且不利于IP3随后与受体结合。当两种协同激动剂都与受体结合时,诱导的结构重排消除了离子通过IP3结合结构域的这两个空间障碍:一个在通道细胞质前庭入口处,另一个位于前庭更深处靠近α结构域的位置。讨论了受体结合核心的动力学在IP3敏感通道门控中的作用。