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编码微生物非氧化可逆羟基芳酸脱羧酶/苯酚羧化酶的基因分布。

Distribution of genes encoding the microbial non-oxidative reversible hydroxyarylic acid decarboxylases/phenol carboxylases.

作者信息

Lupa Boguslaw, Lyon Delina, Gibbs Moreland D, Reeves Rosalind A, Wiegel Juergen

机构信息

Department of Microbiology, The University of Georgia, Athens, GA 30602, USA.

出版信息

Genomics. 2005 Sep;86(3):342-51. doi: 10.1016/j.ygeno.2005.05.002.

Abstract

Bacterial non-oxidative, reversible multi subunit hydroxyarylic acid decarboxylases/phenol carboxylases are encoded by the three clustered genes, B, C, and D, of approximately 0.6, 1.4, and 0.2 kb, respectively. There are more than 160 homologues in the database with significant similarity to gene B (homology to ubiX) and C (ubiD) distributed in all three microbial domains, however, homologues to gene D, are not numerous ( approximately 15). The occurrence of the entire BCD gene cluster encoding for either identified or presumptive hydroxyarylic acid decarboxylase to date has been revealed in Sedimentibacter hydroxybenzoicus (unique genes arrangement CDB), Streptomyces sp. D7, Bacillus subtilis, B. licheniformis, E. coli O157:H7, Klebsiella pneumoniae, Enterobacter cloacae, Shigella dysenteriae, Salmonella enterica, S. paratyphi, S. typhimurium, S. bongori, and S. diarizonae. The corresponding genes from S. hydroxybenzoicus, B. subtilis, Streptomyces sp. D7, E. coli O157:H7, K. pneumoniae, and S. typhimurium were cloned and expressed in E. coli DH5alpha (void of analogous genes), and shown to code for proteins exhibiting non-oxidative hydroxyarylic acid decarboxylase activity.

摘要

细菌非氧化型、可逆多亚基羟基芳酸脱羧酶/苯酚羧化酶由三个成簇基因B、C和D编码,其大小分别约为0.6、1.4和0.2 kb。数据库中有160多个与基因B(与ubiX同源)和C(ubiD)具有显著相似性的同源物,分布在所有三个微生物域中,然而,与基因D的同源物并不多(约15个)。迄今为止,在羟基苯甲酸沉积杆菌(独特的基因排列CDB)、链霉菌属D7、枯草芽孢杆菌、地衣芽孢杆菌、大肠杆菌O157:H7、肺炎克雷伯菌、阴沟肠杆菌、痢疾志贺菌、肠炎沙门氏菌、副伤寒沙门氏菌、鼠伤寒沙门氏菌、邦戈尔沙门氏菌和亚利桑那沙门氏菌中已发现编码已鉴定或推测的羟基芳酸脱羧酶的完整BCD基因簇。来自羟基苯甲酸沉积杆菌、枯草芽孢杆菌、链霉菌属D7、大肠杆菌O157:H7、肺炎克雷伯菌和鼠伤寒沙门氏菌的相应基因被克隆并在大肠杆菌DH5α(无类似基因)中表达,并显示编码具有非氧化型羟基芳酸脱羧酶活性的蛋白质。

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