pIQPNNI：大型最大似然系统发育树的并行重建
pIQPNNI: parallel reconstruction of large maximum likelihood phylogenies.
作者信息
Minh Bui Quang, Vinh Le Sy, von Haeseler Arndt, Schmidt Heiko A
机构信息
Albert-Ludwigs-University Freiburg, Germany.
出版信息
Bioinformatics. 2005 Oct 1;21(19):3794-6. doi: 10.1093/bioinformatics/bti594. Epub 2005 Jul 26.
Abstract
IQPNNI is a program to infer maximum-likelihood phylogenetic trees from DNA or protein data with a large number of sequences. We present an improved and MPI-parallel implementation showing very good scaling and speed-up behavior.
摘要
IQPNNI是一个用于从包含大量序列的DNA或蛋白质数据中推断最大似然系统发育树的程序。我们展示了一种经过改进的、采用MPI并行的实现方式，其具有非常好的可扩展性和加速性能。
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