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用于表征大环内酯-核糖体相互作用的荧光偏振法。

Fluorescence polarization method to characterize macrolide-ribosome interactions.

作者信息

Yan Kang, Hunt Eric, Berge John, May Earl, Copeland Robert A, Gontarek Richard R

机构信息

1250 South Collegeville Road, Collegeville, PA 19426, USA.

出版信息

Antimicrob Agents Chemother. 2005 Aug;49(8):3367-72. doi: 10.1128/AAC.49.8.3367-3372.2005.

DOI:10.1128/AAC.49.8.3367-3372.2005
PMID:16048949
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1196252/
Abstract

A fluorescence polarization assay is described that measures the binding of fluorescently labeled erythromycin to 70S ribosomes from Escherichia coli and the displacement of the erythromycin from these ribosomes. The assay has been validated with several macrolide derivatives and other known antibiotics. We demonstrate that this assay is suitable for determining the dissociation constants of novel compounds that have binding sites overlapping those of macrolides. This homogeneous binding assay provides a valuable tool for defining structure-activity relationships among compounds during the discovery and development of new ribosome-targeting drugs.

摘要

本文描述了一种荧光偏振测定法,该方法用于测量荧光标记的红霉素与大肠杆菌70S核糖体的结合以及红霉素从这些核糖体上的解离。该测定法已通过几种大环内酯衍生物和其他已知抗生素进行了验证。我们证明,该测定法适用于确定具有与大环内酯类药物重叠结合位点的新型化合物的解离常数。这种均相结合测定法为在新型核糖体靶向药物的发现和开发过程中定义化合物之间的构效关系提供了一种有价值的工具。

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本文引用的文献

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Measurement of dissociation constants of inhibitors binding to Src SH2 domain protein by non-covalent electrospray ionization mass spectrometry.通过非共价电喷雾电离质谱法测定抑制剂与Src SH2结构域蛋白结合的解离常数。
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Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria.抗生素与真细菌肽基转移酶中心相互作用的结构基础。
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Tight binding of clarithromycin, its 14-(R)-hydroxy metabolite, and erythromycin to Helicobacter pylori ribosomes.克拉霉素、其14-(R)-羟基代谢物以及红霉素与幽门螺杆菌核糖体的紧密结合。
Antimicrob Agents Chemother. 1994 Jul;38(7):1496-500. doi: 10.1128/AAC.38.7.1496.
10
Erythromycin binding is reduced in ribosomes with conformational alterations in the 23 S rRNA peptidyl transferase loop.在23 S rRNA肽基转移酶环发生构象改变的核糖体中,红霉素结合减少。
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