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脱辅基、(Cd2+)1和(Ca2+)2状态下均匀标记的15N钙结合蛋白D9k的15N NMR归属及化学位移分析。

15N NMR assignments and chemical shift analysis of uniformly labeled 15N calbindin D9k in the apo, (Cd2+)1 and (Ca2+)2 states.

作者信息

Skelton N J, Akke M, Kördel J, Thulin E, Forsén S, Chazin W J

机构信息

Department of Molecular Biology, Scripps Research Institute, La Jolla, CA 92037.

出版信息

FEBS Lett. 1992 Jun 1;303(2-3):136-40. doi: 10.1016/0014-5793(92)80505-b.

Abstract

15N has been uniformly incorporated into the EF-hand Ca(2+)-binding protein calbindin D9k so that heteronuclear experiments can be used to further characterize the structure and dynamics of the apo, (Cd2+)1 and (Ca2+)2 states of the protein. The 15N NMR resonances were assigned by 2D 15N-resolved 1H experiments, which also allowed the identification of a number of sequential and medium-range 1H-1H contacts that are obscured by chemical shift degeneracy in homonuclear experiments. The 15N chemical shifts are analyzed with respect to correlations with protein secondary structure. In addition, the changes in 15N chemical shift found for the apo----(Cd2+)1----(Ca2+)2 binding sequence confirm that the effects on the protein are mainly associated with chelation of the first ion.

摘要

已将¹⁵N均匀掺入EF手型Ca²⁺结合蛋白钙结合蛋白D9k中,以便可以使用异核实验进一步表征该蛋白的脱辅基、(Cd²⁺)₁和(Ca²⁺)₂状态的结构和动力学。通过二维¹⁵N分辨¹H实验确定了¹⁵N NMR共振,该实验还能够识别一些在同核实验中因化学位移简并而被掩盖的顺序和中程¹H-¹H接触。针对与蛋白质二级结构的相关性分析了¹⁵N化学位移。此外,在脱辅基→(Cd²⁺)₁→(Ca²⁺)₂结合序列中发现的¹⁵N化学位移变化证实,对该蛋白的影响主要与第一个离子的螯合有关。

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