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鸽蛋清溶菌酶的结晶及初步X射线结构分析

Crystallization and preliminary X-ray structure analysis of pigeon egg-white lysozyme.

作者信息

Yao M, Tanaka I, Hikichi K, Nitta K

机构信息

Department of Polymer Science, Faculty of Science, Hokkaido University.

出版信息

J Biochem. 1992 Jan;111(1):1-3. doi: 10.1093/oxfordjournals.jbchem.a123703.

Abstract

Calcium binding lysozyme from pigeon egg-white was crystallized by the hanging drop vapor diffusion technique using ammonium sulphate as a precipitant. The crystals belong to the orthorhombic system, space group P2(1)2(1)2(1), and have unit cell dimensions of a = 34.2 A, b = 34.8 A, and c = 99.4 A. One asymmetric unit contains one molecule of the pigeon lysozyme. The crystals diffract X-rays at least to 2.0 A resolution and are suitable for high resolution structure analysis. The diffraction data up to 3.0 A resolution were collected with a diffraction image processor, DIP100, using a Fuji imaging plate as an area detector. The structure was solved by the molecular replacement technique and refined to an R factor of 0.216. Least-squares fitting of the main-chains of pigeon egg-white lysozyme with those of chicken egg-white lysozyme and baboon alpha-lactalbumin showed that the main-chain folding of pigeon lysozyme is more similar to that of chicken lysozyme than that of alpha-lactalbumin. The largest differences between the pigeon and chicken lysozymes are in the surface loop regions.

摘要

采用悬滴气相扩散技术,以硫酸铵作为沉淀剂,使来自鸽蛋清的钙结合溶菌酶结晶。晶体属于正交晶系,空间群为P2(1)2(1)2(1),晶胞参数为a = 34.2 Å,b = 34.8 Å,c = 99.4 Å。一个不对称单元包含一个鸽溶菌酶分子。这些晶体对X射线的衍射至少可达2.0 Å分辨率,适合进行高分辨率结构分析。使用富士成像板作为面探测器,通过衍射图像处理器DIP100收集了分辨率高达3.0 Å的衍射数据。通过分子置换技术解析了结构,并将其精修至R因子为0.216。将鸽蛋清溶菌酶的主链与鸡蛋清溶菌酶和狒狒α-乳白蛋白的主链进行最小二乘拟合,结果表明鸽溶菌酶的主链折叠与鸡溶菌酶的更为相似,而与α-乳白蛋白的差异较大。鸽溶菌酶和鸡溶菌酶之间最大的差异在于表面环区。

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