Rehfuss Marc, Urban James
Division of Biology, Kansas State University, Manhattan KS 66502-4901, USA.
Syst Appl Microbiol. 2005 Jul;28(5):421-9. doi: 10.1016/j.syapm.2005.03.003.
A Gram (-) coccobacillary bacterium, J(T), was isolated from a graywater bioprocessor. 16S rRNA and biochemical analysis has revealed strain J(T) closely resembles Alcaligenes faecalis ATCC 8750T and A. faecalis subsp. parafaecalis DSM 13975T, but is a distinct, previously uncharacterized isolate. Strain J(T), along with the type strain of A. faecalis and its previously described subspecies share the ability to aerobically degrade phenol. The degradation rates of phenol for strain J(T) and reference phenol degrading bacteria were determined by photometrically measuring the change in optical density when grown on 0.1% phenol as the sole carbon source, followed by addition of Gibb's reagent to measure depletion of substrate. The phenol degradation rates of strain J(T) was found to exceed that of the phenol hydroxylase group III bacterium Pseudomonas pseudoalcaligenes, with isolate J(T) exhibiting a doubling time of 4.5 h. The presence of the large subunit of the multicomponent phenol hydroxylase gene in strain J(T) was confirmed by PCR. The presence of the nirK nitrite reductase gene as demonstrated by PCR as well as results obtained from nitrite media indicated denitrification at least to N2O. Based on phenotypic, phylogenetic, fatty acid analysis and results from DNA DNA hybridization, we propose assigning a novel subspecies of Alcaligenes faecalis, to be named Alcaligenes faecalis subsp. phenolicus with the type strain J(T) (= DSM 16503) (= NRRL B-41076).
从生活污水生物处理器中分离出一株革兰氏阴性球杆菌,命名为J(T)。16S rRNA和生化分析表明,菌株J(T)与粪产碱菌ATCC 8750T和粪产碱菌亚种副粪产碱菌DSM 13975T非常相似,但它是一个独特的、以前未被鉴定的分离株。菌株J(T)与粪产碱菌的模式菌株及其先前描述的亚种一样,具有好氧降解苯酚的能力。通过光度法测量以0.1%苯酚作为唯一碳源生长时的光密度变化,然后添加吉布斯试剂测量底物消耗,来测定菌株J(T)和参考苯酚降解细菌的苯酚降解率。发现菌株J(T)的苯酚降解率超过了苯酚羟化酶III组细菌假产碱假单胞菌,分离株J(T)的倍增时间为4.5小时。通过PCR证实了菌株J(T)中多组分苯酚羟化酶基因大亚基的存在。PCR结果以及亚硝酸盐培养基的结果表明,nirK亚硝酸还原酶基因的存在表明至少反硝化至N2O。基于表型、系统发育、脂肪酸分析和DNA-DNA杂交结果,我们建议将粪产碱菌的一个新亚种命名为粪产碱菌亚种酚氧化菌,模式菌株为J(T)(=DSM 16503)(=NRRL B-41076)。